Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04653 and BPUM_2831

See Amino acid alignment / Visit BSNT_04653 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence dna-align/BSNT_04653___mrpC.1.24716.seq
#    -bsequence dna-align/BPUM_2831___mrpC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04653___mrpC-BPUM_2831___mrpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04653___mrpC-BPUM_2831___mrpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04653___mrpC
# 2: BPUM_2831___mrpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity:     255/351 (72.6%)
# Similarity:   255/351 (72.6%)
# Gaps:          18/351 ( 5.1%)
# Score: 887.5
# 
#
#=======================================

BSNT_04653___      1 ATGGAAATCTTAACGGCTGTATTA--GCCGGTATTATTTTTATGGCTGCT     48
                     ||||||.|..|||.|  |.|||||  |.||||||||||||||||.|.||.
BPUM_2831___m      1 ATGGAATTTCTAATG--TCTATTATCGTCGGTATTATTTTTATGACGGCG     48

BSNT_04653___     49 ACGTATTTGCTGCTGTCTAAAAGCCTGCTTCGCGTCATTATCGGAACAGC     98
                     ||.||||||.||||.||.||||||||.||.||.|||||..||||.||.||
BPUM_2831___m     49 ACCTATTTGATGCTTTCAAAAAGCCTACTGCGGGTCATCGTCGGCACTGC     98

BSNT_04653___     99 ACTGTTAAGCCATGGCGTTCATTTAATGCTTTTGACTATGGGAGGATTAA    148
                     ..|.|||||.||.|||||.|||||..|.|||||.||.|||||.||.||||
BPUM_2831___m     99 TGTTTTAAGTCACGGCGTCCATTTGCTTCTTTTAACAATGGGTGGCTTAA    148

BSNT_04653___    149 AGAAAGGCGCCGCTCCGATTT----TGAGCGAGCATGC-CAAATCATTTG    193
                     |.|||||.||..|.||.||||    |.||.|     || ||.|||.|.||
BPUM_2831___m    149 AAAAAGGAGCTCCACCCATTTTAACTAAGGG-----GCTCACATCCTATG    193

BSNT_04653___    194 TCGATCCGCTTCCGCAAGCCCTGATTTTGACCGCAATTGTCATTTCTTTT    243
                     |.||.||..|.||.|||||..|.|||||.||.||.|||||||||.|||||
BPUM_2831___m    194 TAGACCCATTACCACAAGCATTAATTTTAACAGCCATTGTCATTGCTTTT    243

BSNT_04653___    244 GGCGTTACATCATTCATCCTCGTTATGGCCTTTCGCGCTTATCAGGAATT    293
                     ||.||.|||||.||..|.||.||.||||||||.||.||.|..||.||..|
BPUM_2831___m    244 GGTGTGACATCCTTTTTACTTGTCATGGCCTTCCGTGCCTTCCAAGAGCT    293

BSNT_04653___    294 --GAAATCGGACGATATGGATCAAATGAGGGGAAATGATCAACATGAATA    341
                       |||  |.||.||.||||||||||||||.|||||||||||.||||||||
BPUM_2831___m    294 ACGAA--CAGATGACATGGATCAAATGAGAGGAAATGATCAGCATGAATA    341

BSNT_04653___    342 A    342
                     |
BPUM_2831___m    342 A    342


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