Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04648 and BPUM_2826
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:24
# Commandline: needle
# -asequence dna-align/BSNT_04648___yufQ.1.24716.seq
# -bsequence dna-align/BPUM_2826.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04648___yufQ-BPUM_2826.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04648___yufQ-BPUM_2826.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04648___yufQ
# 2: BPUM_2826
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 970
# Identity: 707/970 (72.9%)
# Similarity: 707/970 (72.9%)
# Gaps: 20/970 ( 2.1%)
# Score: 2477.0
#
#
#=======================================
BSNT_04648___ 1 GTGGACATTGTGCAGATTTTATCT----ATCATTGTCCCTGCAACACTCG 46
||||...||.||||.|| ||| |||||.|||||.||||||||.|
BPUM_2826 1 GTGGGATTTCTGCAAAT----TCTTGAAATCATCGTCCCGGCAACACTTG 46
BSNT_04648___ 47 TCTATGCGGCCCCGCTTATTTTAACTGCTCTCGGCGGCGTGTTTTCCGAG 96
|||||||.||.||.|||||||||||.|||||.||.|||||.|||||.||.
BPUM_2826 47 TCTATGCTGCACCACTTATTTTAACCGCTCTTGGAGGCGTCTTTTCAGAA 96
BSNT_04648___ 97 AGATCAGGTGTGGTGAATATCGGCCTAGAAGGCCTCATGATTATCGGGGC 146
|||||||||||.|||||||||||.||.|||||..|.|||.|..||||.||
BPUM_2826 97 AGATCAGGTGTTGTGAATATCGGTCTTGAAGGTTTGATGGTCGTCGGAGC 146
BSNT_04648___ 147 GTTCACCAGCGTGTTA--TTTAATTTATTTTTTGGTCCGGA---ATTAGG 191
.||..||| ||.||| |||||.||.||||||| |.|| .||.||
BPUM_2826 147 ATTTTCCA--GTATTATCTTTAACTTGTTTTTTG---CTGATACGTTTGG 191
BSNT_04648___ 192 TGCCGCCGCACCTTGGCTTTCGCTCCTTGCCGCCATGGCAGCAGGCGCCC 241
||||....|.||.||||||..||||||.|.||..||||||...||||...
BPUM_2826 192 TGCCTTGACCCCGTGGCTTGGGCTCCTCGTCGGAATGGCAATTGGCGGAT 241
BSNT_04648___ 242 TGTTTTCACTGATTCACGCGGCAGCGGCGATTTCGTTTCGCGCCGACCAG 291
||||.||..|||||||.||.|..|||.|.|||.|.||.||.||.||.||.
BPUM_2826 242 TGTTCTCTTTGATTCATGCAGTTGCGACCATTACATTCCGTGCAGATCAA 291
BSNT_04648___ 292 ACAGTCAGCGGTGTCGCCATTAACATGCTGGCGCTTGGGGCAACTTTATT 341
||.|||||.|||||.||.||||||||||||||.|||||.||.||..|.||
BPUM_2826 292 ACGGTCAGTGGTGTTGCGATTAACATGCTGGCACTTGGCGCTACGCTGTT 341
BSNT_04648___ 342 TATCGTCAAACTGATCTACGGCAAAGCGCAGACAGACAAAATTCCAGAGC 391
|.||||.|||||.||.||.||.|||||.||.|||||.||||||.||||||
BPUM_2826 342 TGTCGTAAAACTCATTTATGGGAAAGCTCAAACAGATAAAATTACAGAGC 391
BSNT_04648___ 392 CTTTTTAT-AAGACGAAAATCCCCGGTTTGGGCGATATTCCCGTCTTGGG 440
||||.||| |||..||.|.||||| .|||..|.||.|||||..|..|.||
BPUM_2826 392 CTTTCTATAAAGGTGATATTCCCC-TTTTAAGTGACATTCCGATTATTGG 440
BSNT_04648___ 441 AAAGATCTTCTTTTCGGATGTCTATTATACGTCTATTCTTGCAATAGCAC 490
..|.||.||||||...|||||.|||||||||||.||.||.||..||||.|
BPUM_2826 441 CGATATTTTCTTTAAAGATGTTTATTATACGTCCATACTCGCTTTAGCGC 490
BSNT_04648___ 491 TTGCCTTTATTTCCTGGTTTATCTTGTTCAAAACGCCGTTCGGCCTTCGT 540
||||..||.||.|.||||||.|.||.||.||||.|||.||.||.||||||
BPUM_2826 491 TTGCGGTTGTTGCTTGGTTTGTTTTATTTAAAATGCCATTTGGTCTTCGT 540
BSNT_04648___ 541 ATCCGTTCTGTCGGAGAGCATCCGATGGCGGCCGATACGATGGGAATCAA 590
.|.|||.|.||.|||||.|||||.|||||.||.|||||.|||||||||||
BPUM_2826 541 CTTCGTGCAGTTGGAGAACATCCAATGGCTGCTGATACAATGGGAATCAA 590
BSNT_04648___ 591 CGTATATAAAATGCGCTACATCGGTGTGATGATCAGCGGATTGTTCGGCG 640
.||.||....||||||||.|||||.||..|.||.||.|||.||||.||.|
BPUM_2826 591 AGTGTACCGGATGCGCTATATCGGCGTCTTTATTAGTGGACTGTTTGGTG 640
BSNT_04648___ 641 GTCTCGGCGGCGGCGTATATGCCTCCACAATTGCGCTTGATTTCACGCAC 690
|.||.|||||.|..||.|||||.||.||.||.||||||||||||.|.||.
BPUM_2826 641 GGCTTGGCGGAGCTGTTTATGCGTCAACCATCGCGCTTGATTTCTCACAT 690
BSNT_04648___ 691 TCTACCATCTCCGGGCAAGGCTTTATCGCCCTGGCAGCGCTTGTATTCGG 740
.|.|||||..|.||.|||||.|||||.||.||.||.||.|||||.|||||
BPUM_2826 691 GCGACCATTACTGGACAAGGATTTATTGCACTAGCCGCACTTGTCTTCGG 740
BSNT_04648___ 741 AAAATGGCATCCGATCGGAGCACTGGGGGCCGCCCTGTTTTTCGGATTCG 790
.||||||||.||..||||.|||.||||.||.||..|.||.||.|||||.|
BPUM_2826 741 TAAATGGCACCCATTCGGCGCAATGGGCGCTGCTTTATTCTTTGGATTTG 790
BSNT_04648___ 791 CCCAAAGCTTAAGCATCATTGGATCGCTGCTCCCTCTTTTTAAAGACATA 840
|.|||||.|||||.||.|||||.||.||.||.||.||.||..||||.|||
BPUM_2826 791 CTCAAAGTTTAAGTATTATTGGCTCTCTCCTACCGCTATTCCAAGATATA 840
BSNT_04648___ 841 CCAAATGTGTATATGCTGATGGCTCCTTATGTCTTAACGATTCTCGCTTT 890
||.||.|||||||||||.||.||.||.|||||..|.||.||..|.||..|
BPUM_2826 841 CCGAACGTGTATATGCTCATTGCACCATATGTGCTGACCATCTTAGCACT 890
BSNT_04648___ 891 AACCGGCTTTATCGGGCGGGCAGATGCGCCAAAAGCCAATGGCGTGCCTT 940
.||.|||||.|||||..||||||||||.||.|||||...|||....||||
BPUM_2826 891 TACTGGCTTCATCGGAAGGGCAGATGCACCGAAAGCACTTGGAACACCTT 940
BSNT_04648___ 941 ATATTAAAGGAAAAAGATAA 960
||.|.|||||||||.|||||
BPUM_2826 941 ATTTAAAAGGAAAACGATAA 960
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