Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04627 and BPUM_2808

See Amino acid alignment / Visit BSNT_04627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence dna-align/BSNT_04627___alaR.1.24716.seq
#    -bsequence dna-align/BPUM_2808.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04627___alaR-BPUM_2808.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04627___alaR-BPUM_2808.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04627___alaR
# 2: BPUM_2808
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity:     396/501 (79.0%)
# Similarity:   396/501 (79.0%)
# Gaps:           0/501 ( 0.0%)
# Score: 1560.0
# 
#
#=======================================

BSNT_04627___      1 ATGAAATTGACAGAAAAAGAAACAGAAATATTAGAAATTTTAGACGAAAA     50
                     ||||||.|.||||||||||||||.|||||||||||.||||||||.|||||
BPUM_2808          1 ATGAAACTAACAGAAAAAGAAACTGAAATATTAGAGATTTTAGATGAAAA     50

BSNT_04627___     51 CAGCCGCGCCGATTTAGAAACAATCGCAAAGATGGCGGGCATCCCTGTAA    100
                     ||||||.|||||||||.|.||.||.|||||.|||||.|||.|..|...|.
BPUM_2808         51 CAGCCGTGCCGATTTAAATACCATTGCAAAAATGGCAGGCGTGACAACAG    100

BSNT_04627___    101 ATGAAGTAAAAACAATTATTGACAAACTGGAGAAAGAAAAGGTTATTATC    150
                     |.||||.|.||.|.||||||.|.|||||.||..|..||||.||.|||||.
BPUM_2808        101 AAGAAGCAGAAGCGATTATTCAAAAACTTGAAGATCAAAAAGTCATTATT    150

BSNT_04627___    151 GATTATTCCGCTATGATTGATTGGCGAAAAGTAGACGGACATGAGGGCGT    200
                     ||||||||..|.||||||||||||||.||||||||.||.||.||.|||||
BPUM_2808        151 GATTATTCAACCATGATTGATTGGCGTAAAGTAGATGGTCACGAAGGCGT    200

BSNT_04627___    201 TACGGCCATGATCGACGTCAAAGTAACGCCGAAGCGGGGCGTCGGTTTTG    250
                     .||.||.|||||.||.||||||||.||.||.||..|.||||||||.||||
BPUM_2808        201 CACAGCAATGATTGATGTCAAAGTGACACCCAAAAGAGGCGTCGGATTTG    250

BSNT_04627___    251 ATGAAGTGGCGGAACGGATTTACCGATTCCAAGAGGTTGAATCAGTTTAC    300
                     |||||.|.||.|||||.|||||.||.||.||.||.||.||.||.||.||.
BPUM_2808        251 ATGAAATTGCTGAACGTATTTATCGCTTTCAGGAAGTGGAGTCTGTCTAT    300

BSNT_04627___    301 CTGATGTCAGGCGTATACGATTTGTCTGTCGTGATTCGCGGCAATTCGAT    350
                     ||.|||||||||||.||.|||.|.|||||.|||||.|||||.|..||.||
BPUM_2808        301 CTCATGTCAGGCGTTTATGATCTATCTGTTGTGATCCGCGGAAGATCTAT    350

BSNT_04627___    351 GTCTGACGTAGCGCGTTTTGTTTCGGATAAACTCTCAACGCTTGATTCAG    400
                     ||||||..|.||.||.|||||.||.||.|||.|.||.||.||||||||.|
BPUM_2808        351 GTCTGATATTGCCCGCTTTGTGTCTGAAAAATTATCGACACTTGATTCCG    400

BSNT_04627___    401 TTGTTTCTACGACAACCCATTTTATCCTGAAAAAATACAAGCATGACGGC    450
                     |||||||.||.||.|||||.|||||..||||||.|||.||.|||||.||.
BPUM_2808        401 TTGTTTCAACAACTACCCACTTTATTTTGAAAAGATATAAACATGATGGG    450

BSNT_04627___    451 AAAGTGTTTGAAACAGGAGACGACGACAAAAGAATCGTGGTGTCACCGTA    500
                     |||||||||||||||||||||||.|||||||||||||||||||||||.||
BPUM_2808        451 AAAGTGTTTGAAACAGGAGACGATGACAAAAGAATCGTGGTGTCACCTTA    500

BSNT_04627___    501 A    501
                     |
BPUM_2808        501 A    501


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