Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04625 and BPUM_2806
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence dna-align/BSNT_04625___gspM.1.24716.seq
# -bsequence dna-align/BPUM_2806___yugI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04625___gspM-BPUM_2806___yugI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04625___gspM-BPUM_2806___yugI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04625___gspM
# 2: BPUM_2806___yugI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 336/399 (84.2%)
# Similarity: 336/399 (84.2%)
# Gaps: 12/399 ( 3.0%)
# Score: 1422.5
#
#
#=======================================
BSNT_04625___ 1 ATGGCAGCAAAATTTGAAGTGGGCAGTGTTTACACTGGTAAAGTTACAGG 50
|||||..||||.||||||||.|||||||||||||||||||||||.|||||
BPUM_2806___y 1 ATGGCGACAAAGTTTGAAGTAGGCAGTGTTTACACTGGTAAAGTAACAGG 50
BSNT_04625___ 51 ATTACAAGCGTATGGTGCGTTTGTTGCATTAGATGAAGAAACTCAAGGTT 100
||||||||||||||||||||||||||||||||||||||||||||||||..
BPUM_2806___y 51 ATTACAAGCGTATGGTGCGTTTGTTGCATTAGATGAAGAAACTCAAGGAC 100
BSNT_04625___ 101 TAGTACACATTTCTGAAGTGACTCACGGTTTCGTAAAAGATATCAACGAG 150
|.||.||.|||||||||||.||.||.||.||.||||||||.|||||||||
BPUM_2806___y 101 TTGTGCATATTTCTGAAGTAACACATGGCTTTGTAAAAGACATCAACGAG 150
BSNT_04625___ 151 CACCTTTCAGTTGGCGACGAAGTACAAGTAAAAGTACTTGCTGTTGATGA 200
|||||||||.||||.||||||||||||||||||||.|||.||||||||||
BPUM_2806___y 151 CACCTTTCAATTGGTGACGAAGTACAAGTAAAAGTTCTTTCTGTTGATGA 200
BSNT_04625___ 201 AGAAAAAGGCAAAATCAGCCTTTCAATTCGTGCGACACAAGCTGCGCCTG 250
|.|...|||.||||||||||||||.||.|||||||||||||.|||.||.|
BPUM_2806___y 201 AAATGCAGGTAAAATCAGCCTTTCTATCCGTGCGACACAAGATGCACCAG 250
BSNT_04625___ 251 AGAAAAAAGAAAGCAAACCAAGAAAACCTAAAG----CTGCTCAAGTAAG 296
|.|.||||||||||||.||||..|||| |||| |.| |||||.|.
BPUM_2806___y 251 AAAGAAAAGAAAGCAAGCCAAAGAAAC--AAAGACCACAG--CAAGTGAA 296
BSNT_04625___ 297 CGAAGAAGCTTCTACACCACAAGGTTTCAACACATTAAAAGATAAGCTTG 346
.|||||||||.||.||||||||||||||||.|||.|.||||||||.||||
BPUM_2806___y 297 AGAAGAAGCTGCTGCACCACAAGGTTTCAATACACTTAAAGATAAACTTG 346
BSNT_04625___ 347 AAGAGTGGATCGA--AATGTCCAACCGCAAAGACCTTATCAAAAAATAA 393
||||||||||.|| || ||.|||||.|||||.||.|||||.||||||
BPUM_2806___y 347 AAGAGTGGATTGAGCAA--TCTAACCGTAAAGATCTGATCAAGAAATAA 393
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