Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04623 and BPUM_2805
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:20
# Commandline: needle
# -asequence dna-align/BSNT_04623___yuzA.1.24716.seq
# -bsequence dna-align/BPUM_2805.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04623___yuzA-BPUM_2805.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04623___yuzA-BPUM_2805.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04623___yuzA
# 2: BPUM_2805
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity: 176/241 (73.0%)
# Similarity: 176/241 (73.0%)
# Gaps: 8/241 ( 3.3%)
# Score: 591.0
#
#
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BSNT_04623___ 1 ATGAGTACCATTCAAAGAATTTGTCTTGTATTAACCATCATTGGCGCCAT 50
||||||.|.|||||..|.|||...||.||..|.||.||.||.||.||.||
BPUM_2805 1 ATGAGTGCTATTCAGCGTATTGCCCTCGTGCTCACGATTATCGGTGCTAT 50
BSNT_04623___ 51 TAACTGGGGACTGATCGGATTTTTCCAATTTGACTTAGTAGCGGCTATCT 100
||||||||||||.|||||.|||||.|||||||||||||||||.||.||||
BPUM_2805 51 TAACTGGGGACTAATCGGCTTTTTTCAATTTGACTTAGTAGCAGCGATCT 100
BSNT_04623___ 101 TCGGCGGCCAAGGGTCAGCTCTTTCCCGAATCATTTACGGACTTGTCGGA 150
|.|||||.|||||.||.||..|.||.||.||.|||||.||.|||||.|||
BPUM_2805 101 TTGGCGGACAAGGCTCTGCATTATCACGTATTATTTATGGTCTTGTTGGA 150
BSNT_04623___ 151 ATCGCCGG-CTTAATCAACCTCGGTCTGCTATTTAAGCCAAACGAGGAA- 198
||.||.|| ||| .|.|||||.||||||.|.||.|||||||.|||.|||
BPUM_2805 151 ATTGCAGGTCTT-GTTAACCTTGGTCTGTTGTTCAAGCCAAGCGAAGAAG 199
BSNT_04623___ 199 -AGATC-ACGTGAAGAAGCAGCAAATCCTGAAATGCGATAG 237
.|.|| .||.||.| ||| |.|||||.||..|.||.||.
BPUM_2805 200 CTGTTCGCCGCGACG-AGC--CGAATCCAGAGGTTCGCTAA 237
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