Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04610 and BPUM_2797
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:19
# Commandline: needle
# -asequence dna-align/BSNT_04610___yugP.1.24716.seq
# -bsequence dna-align/BPUM_2797.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04610___yugP-BPUM_2797.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04610___yugP-BPUM_2797.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04610___yugP
# 2: BPUM_2797
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 691
# Identity: 541/691 (78.3%)
# Similarity: 541/691 (78.3%)
# Gaps: 26/691 ( 3.8%)
# Score: 2091.5
#
#
#=======================================
BSNT_04610___ 1 ATGCTG----TTTATATTTTTAACAATAGCCGCATTGGGATTGTCGTTTT 46
|||||| ||||| ||||||||..|.||||||||||||||.||.||||
BPUM_2797 1 ATGCTGTTTTTTTAT-TTTTTAACTTTTGCCGCATTGGGATTATCATTTT 49
BSNT_04610___ 47 GGGCACAATTTAAAGTAAAGAGCAACTTTGAAAAATATTCAAAAGTGGAA 96
|||||||||||||||||||||..||.||||||||.||||||||.||.|||
BPUM_2797 50 GGGCACAATTTAAAGTAAAGAATAATTTTGAAAAGTATTCAAAGGTTGAA 99
BSNT_04610___ 97 GCCTCAAGCGGACGT------ACAGGGGCAGAAACGGCAAGACGGATTTT 140
||.||.| || |||||.||.|||||.||..|||..|||||
BPUM_2797 100 GCATCTA------GTATGAAAACAGGTGCGGAAACCGCTCGACATATTTT 143
BSNT_04610___ 141 AGATATAAACGGTCTTTACGACGTGCCGGTCGAACCGGTAAGAGGCACTT 190
||||...|||||..|.|||||||||||.||.||||||||||||||.||||
BPUM_2797 144 AGATCGCAACGGGTTATACGACGTGCCTGTTGAACCGGTAAGAGGAACTT 193
BSNT_04610___ 191 TAACAGACCATTACGACCCGAC-AAGACGGGTGGTGCGTTTATCTGAGCC 239
|.||.||.|||||||||||||| .|| ||.|||||.||.||||||||.||
BPUM_2797 194 TGACTGATCATTACGACCCGACGCAG-CGTGTGGTTCGCTTATCTGAACC 242
BSNT_04610___ 240 GGTCTATTACGGCCGCTCAATTTCCGCCATATCCGTAGCTTCCCATGAAG 289
.||.||.|||||||..||.|||||.|||||.||.||.||.||.||.||.|
BPUM_2797 243 TGTGTACTACGGCCATTCCATTTCGGCCATTTCAGTCGCATCACACGAGG 292
BSNT_04610___ 290 TCGGACATGCCTTGCAGCATCAGGAGTCATATGGTGCGCTTGTGCTGAGA 339
|.||||||||||||||||||||||||||.||||||||||||||..|||||
BPUM_2797 293 TTGGACATGCCTTGCAGCATCAGGAGTCCTATGGTGCGCTTGTCTTGAGA 342
BSNT_04610___ 340 CATAAAATCTTCCCAGTCGTGAATTTTGCATCCGGTGTAGCTCCTTTGCT 389
|||||.|||||.||.||||||||.||||||||.|||||.||.||..|.||
BPUM_2797 343 CATAAGATCTTTCCTGTCGTGAACTTTGCATCTGGTGTTGCCCCGCTTCT 392
BSNT_04610___ 390 TTTCTTAGGAGGCATGCTT-CTCGGCAGCCTGAATTTGATCGGGCTTGGC 438
||||.|.||.||.|| ||| ||.||||||||.||.||.|||||||||||.
BPUM_2797 393 TTTCCTTGGTGGAAT-CTTACTTGGCAGCCTTAACTTAATCGGGCTTGGG 441
BSNT_04610___ 439 ATCATACTGTTTTCAGCGGCAGTCTTTTTCCAGCTGATTACATTGCCTGT 488
|||||..||||.||||||||.||.||.||.|||||..|.|||||||||||
BPUM_2797 442 ATCATTTTGTTCTCAGCGGCTGTGTTCTTTCAGCTTGTGACATTGCCTGT 491
BSNT_04610___ 489 CGAATTCAATGCAAGTTCACGTGCGAAGCAGATTATTGTGTCAGAAGGAT 538
|||.||.|||||||||||.||||||||..|.||.|||||.|||||||||.
BPUM_2797 492 CGAGTTTAATGCAAGTTCTCGTGCGAAAGATATCATTGTTTCAGAAGGAA 541
BSNT_04610___ 539 TCATCCGAAACAATGAAGAAAATGGGGTAAATAAAGTGCTGAGTGCTGCT 588
||||..|||.||.||||||||..||.||.||.||.|||.|.|.|||.||.
BPUM_2797 542 TCATTAGAAGCAGTGAAGAAAGAGGCGTGAACAAGGTGTTAAATGCGGCA 591
BSNT_04610___ 589 GC-CTTAACGTATGTGGCCGCCGCCCTGGTTTCCCTGTTTGAACTACTTC 637
|| ||| |||||.||.||.||.|||||.||.|||.||||||||.|.||.|
BPUM_2797 592 GCTCTT-ACGTACGTCGCAGCTGCCCTTGTCTCCTTGTTTGAATTGCTCC 640
BSNT_04610___ 638 GTTTTGTGATGATTTTCTTAAACGGTCGTGATGAGAATTAA 678
|||||||.|||||.|||.||||.||.|||.||| |||||
BPUM_2797 641 GTTTTGTAATGATCTTCCTAAATGGCCGTAATG---ATTAA 678
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