Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02133 and BPUM_2767
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence dna-align/BSNT_02133___xkdG.1.24716.seq
# -bsequence dna-align/BPUM_2767___xkdG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02133___xkdG-BPUM_2767___xkdG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02133___xkdG-BPUM_2767___xkdG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02133___xkdG
# 2: BPUM_2767___xkdG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 959
# Identity: 694/959 (72.4%)
# Similarity: 694/959 (72.4%)
# Gaps: 58/959 ( 6.0%)
# Score: 2356.5
#
#
#=======================================
BSNT_02133___ 1 TTGAGAAATCAAGAGATCATTCGGAAAGCGGAAATGTCGCTT-TCTGCTT 49
.||||||||||||||.|.|||||.||.||.||||||.|.||| .|.|| |
BPUM_2767___x 1 GTGAGAAATCAAGAGTTGATTCGCAAGGCCGAAATGACACTTGCCAGC-T 49
BSNT_02133___ 50 TAAAAAGCGGCGGGCTTATGAACCCTGCGCAAGC--ATC---GGCTTTTA 94
||||||.||||||.||.||||| |||||.| ||| ..|.||.|
BPUM_2767___x 50 TAAAAACCGGCGGTCTCATGAA-----CGCAACCCAATCCAACACATTCA 94
BSNT_02133___ 95 TCCGCATGGTGCAAAACACGCCGACCATTTTCAGTGAATCCCGCGTGATT 144
|..|.|||.||||||||||.||.|||.||||.|.|||..|.|||.|.|||
BPUM_2767___x 95 TTAGAATGATGCAAAACACACCAACCGTTTTAAATGATGCACGCATCATT 144
BSNT_02133___ 145 CAAATGGAAAATGACTCGCAAAAATTTGAGAAAATCGGCTTCGGCCAGCG 194
|..|||||||.|||.||.||||||.||||.|||||||||||.||||||||
BPUM_2767___x 145 CCGATGGAAAGTGATTCACAAAAAATTGAAAAAATCGGCTTTGGCCAGCG 194
BSNT_02133___ 195 TATTCTGCGGGCTGCGCAAGAAGGAAAAGCACTGTCAAACGA-----CGA 239
||||.||||..|.||..|||||||..||||.|| |.|..||| ||.
BPUM_2767___x 195 TATTTTGCGTCCAGCAGAAGAAGGTCAAGCGCT-TGATGCGAAAGACCGT 243
BSNT_02133___ 240 GCTGACAGTTCCAACGACAAGCACTGTCCAGCTGAACACGAAGGAAGTCA 289
|.| ||.|||.||||||||||||||||.||.||..|.||.||.||||
BPUM_2767___x 244 GTT----GTCCCAGCGACAAGCACTGTCCATCTAAATGCAAAAGAGGTCA 289
BSNT_02133___ 290 TTGCGGAAATTAACATTACGTATGACA-CACTTGAAAACAATATTGAAAA 338
||||.||||||.|.||.||.||.|||| || |||||||||||||||||||
BPUM_2767___x 290 TTGCAGAAATTCATATGACCTACGACAGCA-TTGAAAACAATATTGAAAA 338
BSNT_02133___ 339 AGACGGCCTGCAGCAGACAATCATGCAAATTTTAGCAGAGCGCGCAGCAG 388
||||||..|.|||||||||||.||||||||..|.||.||.||.|||||||
BPUM_2767___x 339 AGACGGAATTCAGCAGACAATTATGCAAATGCTGGCTGAACGAGCAGCAG 388
BSNT_02133___ 389 TTGATATTGAAGAGCTGATCGTTAACGGTGATACAGCATCAGCTGATCCG 438
||||||||||||||||.|||||.||.||.|||||..|.|||.|||||||.
BPUM_2767___x 389 TTGATATTGAAGAGCTCATCGTCAATGGAGATACGACTTCATCTGATCCA 438
BSNT_02133___ 439 TATCTGGCACAGCTGGACGGCATCCGTAAACAGGCGGTTTCCCATATCGT 488
|.|.|.||.||..||||.||..||.|.|||||.||.||..|.|||||.||
BPUM_2767___x 439 TTTTTAGCCCAAATGGATGGTGTCAGAAAACAAGCAGTCACTCATATTGT 488
BSNT_02133___ 489 TGACATG--AACGGTGAAGAACTGTCCAGAG-CGACA----TTCAAGAAA 531
.| ||| ||.||.|..|||.| .|| ||.|| ||.||..||
BPUM_2767___x 489 GG--ATGCAAATGGAGCGGAAAT-----TAGCCGCCAAATGTTGAAACAA 531
BSNT_02133___ 532 GGCT-TAAAGGCAGTTCCGCCAAAATATTTGCGCATCCCTCAGGAATTCA 580
|.|| |||| |||.|.|||.||||||||||.||..|.||||||||.|||.
BPUM_2767___x 532 GCCTATAAA-GCAATGCCGTCAAAATATTTACGTGTACCTCAGGATTTCC 580
BSNT_02133___ 581 GATTCTATACGTCTCACGGCTTAGAAGTTGAATGGAAGGACCGCGTGGCA 630
|||||||.||.||.|...||||||||||.||.||||||||.|..||.|||
BPUM_2767___x 581 GATTCTACACATCCCCAAGCTTAGAAGTGGAGTGGAAGGATCAAGTAGCA 630
BSNT_02133___ 631 GACCGCCAGACAAACCTTGGGGACCAGGCTG-TTCAGGGCGG-CTTGTCA 678
.||||||||||||..||.||.||...|| || ||||.||||| ||| ||.
BPUM_2767___x 631 AACCGCCAGACAACTCTCGGAGATGCGG-TGATTCAAGGCGGACTT-TCT 678
BSNT_02133___ 679 ACAGCATTCGGCGTACCGGTCAAAGGAGTATCCAATATTCAGCCGTACAC 728
.|.||||||||.||||||||||||||..|..|||||||.|||.|.||
BPUM_2767___x 679 TCTGCATTCGGTGTACCGGTCAAAGGCCTTGCCAATATGCAGACATA--- 725
BSNT_02133___ 729 AGTCGGTGAGGGAGACGCGCAATATGACGCTTCTGATATCATTCTCACAC 778
|||.|.|| || |.||.| ||||..||.|||||..|.||.||||
BPUM_2767___x 726 ------TGACGAAG-CG-GGAACA-GACGTATCAGATATTTTGCTGACAC 766
BSNT_02133___ 779 ATCCGAAAAATATCATTCTCGGCTTCTCCCGCAATATCCGAATTGAAGTC 828
|.||.||||||||.||..|.||.||.||.||..||||.|||||||||||.
BPUM_2767___x 767 ACCCTAAAAATATTATCGTAGGGTTTTCTCGTCATATTCGAATTGAAGTA 816
BSNT_02133___ 829 GACAAAGACATCCGCTCCCGTAAATTCATTATTGTCTTAACGGCCAAGCT 878
||.|||||.||.||...|||.|||||.||||||||..|.||.||.|||||
BPUM_2767___x 817 GAAAAAGATATTCGTAGCCGGAAATTTATTATTGTTCTGACAGCGAAGCT 866
BSNT_02133___ 879 GGACAGCAAGTTCGAGGAAGAGGATGCCTG-CGCGAAATTAATTAACGTA 927
.||||||||.||.||||||||||||| ||| .||.|||.|.||.||.||.
BPUM_2767___x 867 AGACAGCAAATTTGAGGAAGAGGATG-CTGTAGCAAAAGTGATGAAAGTG 915
BSNT_02133___ 928 AAAGAATAA 936
|||||.||.
BPUM_2767___x 916 AAAGAGTAG 924
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