Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02135 and BPUM_2766
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence dna-align/BSNT_02135.1.24716.seq
# -bsequence dna-align/BPUM_2766___yqbG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02135-BPUM_2766___yqbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02135-BPUM_2766___yqbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02135
# 2: BPUM_2766___yqbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 249/444 (56.1%)
# Similarity: 249/444 (56.1%)
# Gaps: 120/444 (27.0%)
# Score: 590.5
#
#
#=======================================
BSNT_02135 1 ATGCTCATTGAACCGACTGACGTAGCCT-----CCTATTCGGTCTATGAT 45
|||.|.||| .|..||||.|.| || |||||||.||.|.|||.
BPUM_2766___y 1 ATGATGATT---TCTCCTGAAGAA--CTGCAAGCCTATTCTGTATTTGAG 45
BSNT_02135 46 CGGGTGAAAAACAG----GCCGGAAGAGCTGCTGGC-GCAGGATATCATC 90
||.||||||||..| |..|.|||| |||.| ||| |||||.|||
BPUM_2766___y 46 CGTGTGAAAAATCGATCTGTAGAAAGA----CTGACAGCA-GATATTATC 90
BSNT_02135 91 GAGGCGGAAGCAGAAGCGGC------TCTCATCACGGGCCACCGCTTT-- 132
|||||||||||.|| ||..|||...||.|| .|.|||
BPUM_2766___y 91 ------GAAGCAGAAGCTGCGGTATTTCAGATCGTAGGTCA-TGATTTCT 133
BSNT_02135 133 -----GAAGACAGCTTGTATGATCCGCTGCCCG-----GCAAGGTGAAGT 172
|||.| .|||.|.||.||.||.| |||| |||
BPUM_2766___y 134 CAAGCGAAAA------ATATCAGCCACTCCCTGAAAAAGCAA---GAA-- 172
BSNT_02135 173 TGGCTTTAGTAAAGCTTGCCCAGTATTTTGCGCTTG-TCAACAGCGATGA 221
|.||.|||.|||||.|.|||||.|||||||| |.|| |.||....|||||
BPUM_2766___y 173 TCGCATTATTAAAGATGGCCCAATATTTTGC-CATGTTGAATGATGATGA 221
BSNT_02135 222 ATCTGCCTCATCAA--GCTATCAGTCTGAGAAAATGGGGGATTATTCCTA 269
|||| .|.||.|| |||.|..|||.||.||||||||.||||||||.||
BPUM_2766___y 222 ATCT--ATGATGAAGGGCTTTACGTCAGAAAAAATGGGTGATTATTCATA 269
BSNT_02135 270 --CACGGTTTCCGGAGAAGGCGGC------ATTCAGCGG----CCAGAGG 307
|| |||||.|| |.|.|..|| ||..|.|
BPUM_2766___y 270 TGCA------------AAGGCAGCTGATCAAGTAAAAGGCAAACCTTATG 307
BSNT_02135 308 TATAT--CAT--TTGCTCGAGGAGTTT-----ATCA------CGCCGGGC 342
||||| |.| ||| ||||..|..|| |||| ||| |||
BPUM_2766___y 308 TATATGCCCTGCTTG-TCGATTACATTGAACCATCATTAACTCGC--GGC 354
BSNT_02135 343 --TACGCCCCTGAATCCTCCAGACTGAAGGTGAGGTCTTTATGA 384
|| |||.|.|.||||||||.||.||||||
BPUM_2766___y 355 AGTA--------------CCAAATTAAAGGTGAGATCATTATGA 384
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