Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02146 and BPUM_2760

See Amino acid alignment / Visit BSNT_02146 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence dna-align/BSNT_02146___xkdM.1.24716.seq
#    -bsequence dna-align/BPUM_2760___xkdM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02146___xkdM-BPUM_2760___xkdM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02146___xkdM-BPUM_2760___xkdM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02146___xkdM
# 2: BPUM_2760___xkdM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 449
# Identity:     343/449 (76.4%)
# Similarity:   343/449 (76.4%)
# Gaps:          10/449 ( 2.2%)
# Score: 1307.0
# 
#
#=======================================

BSNT_02146___      1 ATGGCATTAAAAGCACAAAACACAATTTCAGGAAAAGAAGGCCGTTTATT     50
                     |||||.||.|||||.|||||.|||||||||||.||||||||.|||.|.||
BPUM_2760___x      1 ATGGCTTTTAAAGCGCAAAATACAATTTCAGGTAAAGAAGGTCGTCTTTT     50

BSNT_02146___     51 CCTCGATGGCGAGGAAATGGCGCACATCAAAACATTTGAAGCAAACGTTG    100
                     |.|.||.||.|||||..|.||....||||||||.||||||||||||||.|
BPUM_2760___x     51 CTTAGAAGGTGAGGAGCTTGCCTTTATCAAAACGTTTGAAGCAAACGTGG    100

BSNT_02146___    101 AGAAAAACAAATCTGAAGTCAACATTATGGGCCGCCGCATGACAGGCCAT    150
                     |||||||.|||||.|||||||||.|.||||||||..|.|||||.||.|||
BPUM_2760___x    101 AGAAAAATAAATCAGAAGTCAACGTGATGGGCCGAAGAATGACTGGTCAT    150

BSNT_02146___    151 AAAACAACAGGGGCAAATGGAACAGGGACCGCAACGTTCTACAAAGTCAC    200
                     |||||||||||.||||||||||||||.||.||.||.|||||.|||||.||
BPUM_2760___x    151 AAAACAACAGGAGCAAATGGAACAGGAACGGCCACATTCTATAAAGTTAC    200

BSNT_02146___    201 ATCAAAATTCGTGCTATTGATGATGGACTATGTCAAAAAAGGCAGCGACC    250
                     |||....|||||.|.|||.|||.|..|||||||.||||||||....||.|
BPUM_2760___x    201 ATCTCGTTTCGTTCAATTAATGCTCAACTATGTGAAAAAAGGGGAAGATC    250

BSNT_02146___    251 CTTATTTCACGCTCCAAGCCGTGCTGGATGATCAATCCTCCGGCCGGGGC    300
                     ||||||||||.||.|||||.|||.|.||.|||.||||.||.|||||.||.
BPUM_2760___x    251 CTTATTTCACTCTTCAAGCGGTGATTGACGATAAATCATCAGGCCGAGGT    300

BSNT_02146___    301 ACAGAGCGAGTCACGCTGTACGACGTCAACTTTGACTCTGCCAAAATCGC    350
                     ||.|||||.||.||..|.|..||.||||||||.||.||.||.|||||.||
BPUM_2760___x    301 ACGGAGCGTGTAACATTATTTGATGTCAACTTCGATTCAGCTAAAATTGC    350

BSNT_02146___    351 AAGCCTTGATGTCAATTCAGAAGCGTTAGAGGAAGAAGTTCCATTTACAT    400
                     ..|.||.||||||.||||||||||..|.||.|||||||||||.|||||.|
BPUM_2760___x    351 TGGACTGGATGTCGATTCAGAAGCACTTGAAGAAGAAGTTCCGTTTACGT    400

BSNT_02146___    401 TCGAAGACTTCGACGTCCCTGAAAAGCT-----ATCTGACACGTTTTAA    444
                     ||||.|||||.||..|.|||||||||||     ||     .|.||||||
BPUM_2760___x    401 TCGAGGACTTTGATCTTCCTGAAAAGCTGAAGAAT-----TCCTTTTAA    444


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