Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02148 and BPUM_2757

See Amino acid alignment / Visit BSNT_02148 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence dna-align/BSNT_02148.1.24716.seq
#    -bsequence dna-align/BPUM_2757___xkdN2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02148-BPUM_2757___xkdN2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02148-BPUM_2757___xkdN2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02148
# 2: BPUM_2757___xkdN2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     101/168 (60.1%)
# Similarity:   101/168 (60.1%)
# Gaps:          39/168 (23.2%)
# Score: 354.0
# 
#
#=======================================

BSNT_02148         1 ------------------ATGCACGAGCTTCACTATTCCCCATC------     26
                                       |||||.|||||||||||.||||||||      
BPUM_2757___x      1 GTGTTTTTATATTACGCCATGCATGAGCTTCACTACTCCCCATCTGAACT     50

BSNT_02148        27 ---AGATTTATTGGCGCTCTACGAAGCGCCCAGAAACTATAAAGCGCTGT     73
                        |||||||         ||.|||.|.||.|||...|.||||||.||..
BPUM_2757___x     51 CCTAGATTTA---------TATGAATCACCAAGACCGTTTAAAGCACTCC     91

BSNT_02148        74 TGTATGGACTGATCGGATATAAGCTCGATCTCCTTGAAAAACAAGCAAAG    123
                     |.|..|||||.|||.|.||.|||||.||..|.||.||||||.||||||||
BPUM_2757___x     92 TATTCGGACTCATCAGCTACAAGCTAGACATGCTAGAAAAAGAAGCAAAG    141

BSNT_02148       124 AAAGGAGGGGCATCGTAA    141
                     |||||||||..|   |||
BPUM_2757___x    142 AAAGGAGGGAAA---TAA    156


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