Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02154 and BPUM_2752

See Amino acid alignment / Visit BSNT_02154 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence dna-align/BSNT_02154___xkdS.1.24716.seq
#    -bsequence dna-align/BPUM_2752___xkdS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02154___xkdS-BPUM_2752___xkdS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02154___xkdS-BPUM_2752___xkdS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02154___xkdS
# 2: BPUM_2752___xkdS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 458
# Identity:     286/458 (62.4%)
# Similarity:   286/458 (62.4%)
# Gaps:          67/458 (14.6%)
# Score: 834.0
# 
#
#=======================================

BSNT_02154___      1 ATGGCCCTGACACCAGAAGTGGAGTTTGAAGATATTGAAGATGAGAGCGA     50
                     .||||.||..|||||||.|..||..|||||||.|..|||||.||   .||
BPUM_2752___x      1 GTGGCACTCTCACCAGAGGAAGAAATTGAAGAAACAGAAGAAGA---TGA     47

BSNT_02154___     51 AGTCATTGAAACCTCGCAAACGTACAAAATAGATTTTGAAAACGGAAGAA    100
                     ||...|.|||||||||..|||.||...|||||||.||||||..||.|||.
BPUM_2752___x     48 AGAGGTGGAAACCTCGACAACATATCGAATAGATGTTGAAACTGGCAGAC     97

BSNT_02154___    101 TTACGAATGAGCTG-----ATTACCGGGCTTGAAGCGATCAGGCAGTTCG    145
                     |.||     ||.||     |||.|.||..|||||||.||..|.||.||||
BPUM_2752___x     98 TGAC-----AGGTGAAACCATTTCAGGCATTGAAGCAATTCGTCAATTCG    142

BSNT_02154___    146 TGTATATCGC-CTTACAGACAGAACGCTATGCATATTCCATATACAGCCA    194
                     |.|||||..| |||| .||||||.||.||||||.||.|.||.||||||||
BPUM_2752___x    143 TTTATATGACACTTA-GGACAGAGCGGTATGCACATCCTATCTACAGCCA    191

BSNT_02154___    195 TAATGTCGGAAACGAGCTTCAGGACGTGCTGACAGAT-CATGAGACGACT    243
                     ..|..|.||.|..||..|||||||..|..|.||.||| || ||..|.||.
BPUM_2752___x    192 CGACATTGGTACTGAAATTCAGGAGCTTTTAACGGATACA-GAAGCCACG    240

BSNT_02154___    244 GATGCGTATAAAAAGATGGAGATTCCGAGACTGATAGAAGAGGCGCTGGT    293
                     ||||..||.|||.|.||||||||||||||.|||.||||.||.||..||.|
BPUM_2752___x    241 GATGAATACAAAGAAATGGAGATTCCGAGGCTGCTAGAGGAAGCATTGAT    290

BSNT_02154___    294 TTATGATGACCGGAT--ATCGGCTGTAACAGATTTT---GAGATTGA---    335
                     |...||.||.|||||  |||           ||.||   |||||.||   
BPUM_2752___x    291 TGTGGACGAACGGATTGATC-----------ATATTGAAGAGATAGAGGT    329

BSNT_02154___    336 ---AAAACAAGGCGACGCGTTTCATG-------------TGTCCTTCGTG    369
                        |||..||...||..|||||||||             ||||       
BPUM_2752___x    330 CACAAAGGAAAATGATTCGTTTCATGTCAAGCTAGCGATTGTC-------    372

BSNT_02154___    370 GTGGAGACGGATGAAGGAACGCTTGAGATTGAGGAGGTGATTGGCGAAC-    418
                           ||.||||||||.||..|.||.||.|||||||||| |||.||.| 
BPUM_2752___x    373 ------ACAGATGAAGGCACATTAGAAATAGAGGAGGTGA-TGGAGAGCG    415

BSNT_02154___    419 ATGTTTGA    426
                     ||||||||
BPUM_2752___x    416 ATGTTTGA    423


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