Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04566 and BPUM_2734
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:06
# Commandline: needle
# -asequence dna-align/BSNT_04566___gbsB.1.24716.seq
# -bsequence dna-align/BPUM_2734___gbsB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04566___gbsB-BPUM_2734___gbsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04566___gbsB-BPUM_2734___gbsB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04566___gbsB
# 2: BPUM_2734___gbsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1212
# Identity: 956/1212 (78.9%)
# Similarity: 956/1212 (78.9%)
# Gaps: 3/1212 ( 0.2%)
# Score: 3768.0
#
#
#=======================================
BSNT_04566___ 1 ATGATGACATTAAATATGAAGGTAGAAAGCATGCAGAAATTCCACACATT 50
|||||||||||||||||..|.||||||||||||||.|||||.|||||
BPUM_2734___g 1 ---ATGACATTAAATATGAAAATTGAAAGCATGCAGAAGTTCCATACATT 47
BSNT_04566___ 51 TGAAATTCCGACTGTGATTAAGCATGGAATCGGAGCCATCAAGCATACGG 100
|||||||||||||||.||.||.|||||.|||||..|..|.||.|||...|
BPUM_2734___g 48 TGAAATTCCGACTGTCATCAAACATGGTATCGGCTCAGTGAAACATGTTG 97
BSNT_04566___ 101 GTGAGGAAGTAGCTGCACTGGGCGTTTCAAAAGCGCTCCTTGTCACAGAC 150
|.||.||||||...|||...||.||||||||.|...|.|||||.||||||
BPUM_2734___g 98 GGGAAGAAGTAAAAGCATACGGTGTTTCAAAGGTATTGCTTGTAACAGAC 147
BSNT_04566___ 151 CCAGGGATTTATAAAGCCGGTGTTGCTGATCCTGTAATCGAATCACTTAA 200
||.||.|||||....||.||.||.|...||||.||.||.|..|||.|.||
BPUM_2734___g 148 CCGGGTATTTACCTGGCGGGCGTGGTAAATCCAGTCATTGCTTCATTAAA 197
BSNT_04566___ 201 AGAAGCAGGCATTGAAGTGGTGCTCTTTAATAAAGTTGAGCCAAACCCGC 250
|||||||...||.||.||.||.||.|||.|||||||.|||||||||||||
BPUM_2734___g 198 AGAAGCACAAATCGATGTCGTTCTATTTGATAAAGTAGAGCCAAACCCGC 247
BSNT_04566___ 251 CTGTCCGTCTGGTGAATGAAGGATCTGAGCTTTACAAAAAAGAGAACTGT 300
|.||||||.|.|||||||||||.||||.|.|.||..|||||||...||||
BPUM_2734___g 248 CAGTCCGTTTAGTGAATGAAGGCTCTGCGTTATATGAAAAAGAAGGCTGT 297
BSNT_04566___ 301 AATGGTTTGGTGGCAGTCGGAGGCGGAAGCTCCATGGATACAGCAAAAGC 350
|||||.||.||.|||||.||.|||||||||||.||||||||.|||||.||
BPUM_2734___g 298 AATGGATTAGTCGCAGTAGGCGGCGGAAGCTCAATGGATACGGCAAAGGC 347
BSNT_04566___ 351 AATCGGAGTAGAAGCGACTCACGAAGGAAGCGTGCTTGATTATGAAGCGG 400
.|||||.|||||||||||.||.|||||....||.||||||||.|||||.|
BPUM_2734___g 348 GATCGGTGTAGAAGCGACGCATGAAGGCTCAGTCCTTGATTACGAAGCAG 397
BSNT_04566___ 401 CAGATGGGAAAAAACCGCTGGAAAACCGCATTCCTCCGCTGACGACAATT 450
||||.||||||||||||||.|||||..|.||.||||||.|.||.||.|||
BPUM_2734___g 398 CAGAGGGGAAAAAACCGCTTGAAAATAGAATCCCTCCGTTAACCACTATT 447
BSNT_04566___ 451 CCCACTACAGCTGGAACAGGATCAGAAGTAACCCAATGGGCGGTTATCAC 500
||.||.||.|||||.|||||.||||||||.||.||.|||||.||.|||||
BPUM_2734___g 448 CCAACAACGGCTGGTACAGGTTCAGAAGTGACGCAGTGGGCAGTGATCAC 497
BSNT_04566___ 501 AGATGAAGAAAGAGAATTCAAATTCAACACGGGCGGTCCGCTGATTGCAG 550
||||||||||||||||||||||||||||||.||.||.|||||.|||||||
BPUM_2734___g 498 AGATGAAGAAAGAGAATTCAAATTCAACACAGGTGGCCCGCTCATTGCAG 547
BSNT_04566___ 551 CGCACTTGACCATCATTGATCCTGAGCTTCATGTTTCAATGCCTCCGCAT 600
|.|||.|.||..||||||||||.|||||.|||||.||.|||||.||.|||
BPUM_2734___g 548 CACACCTCACAGTCATTGATCCAGAGCTCCATGTATCCATGCCGCCTCAT 597
BSNT_04566___ 601 GTAACAGCTATGACGGGAATTGATGCGCTCGCCCATGCCATTGAGTGCTA 650
||.|||||.|||||.|||||||||||.||.||.||.||.|||||.|||||
BPUM_2734___g 598 GTGACAGCAATGACTGGAATTGATGCACTTGCACACGCGATTGAATGCTA 647
BSNT_04566___ 651 TACAATGAAATTTGCACAGCCAATCACGGATGCGGTTGCCTTAATGGCGA 700
|||||||||||||||.|||||.||.||.||||||||.||..|.|||||.|
BPUM_2734___g 648 TACAATGAAATTTGCTCAGCCTATTACAGATGCGGTCGCGCTCATGGCCA 697
BSNT_04566___ 701 TTGAGTATGCCGCTCATTACATTAAGAGGGCATTTGCTGACGGAGAGGAT 750
||||.|||||.||||||||.|||....|.||.|||||.||.||.|||||.
BPUM_2734___g 698 TTGAATATGCAGCTCATTATATTCGCCGTGCCTTTGCCGATGGTGAGGAC 747
BSNT_04566___ 751 CTGGAAGCAAGGTACGGAATGGCGCAGGCTGCGATGCTTGCCGGTCTTTC 800
.|.|||||.||.||.||||||||.||.||.||.|||||||||||.|||||
BPUM_2734___g 748 ATAGAAGCCAGATATGGAATGGCACAAGCCGCAATGCTTGCCGGGCTTTC 797
BSNT_04566___ 801 TTACGGAAGTGAATCAGCGGGCGCGGCTCATGCGATGAGCCAAACGCTTG 850
|||.|||||.||||||||.|||||.||.||.||||||||.|||||.||.|
BPUM_2734___g 798 TTATGGAAGCGAATCAGCTGGCGCTGCACACGCGATGAGTCAAACACTCG 847
BSNT_04566___ 851 GCGGTATTATCCCAGTCGCTCACGGCCAATGTGTAGCGGCGATGATGGGC 900
|.||.||.||.||.||.||.|||||.||.||||||||.||.||||||||.
BPUM_2734___g 848 GAGGAATGATTCCTGTAGCGCACGGTCAGTGTGTAGCAGCAATGATGGGA 897
BSNT_04566___ 901 CCTGTCATGGAATACAACTGGAAGGGCTATCCTGAGAAGTTTGCGCGTAT 950
||.||||||||.||.||.||||||||.|||||.||.||.|||||.|||||
BPUM_2734___g 898 CCAGTCATGGAGTATAATTGGAAGGGGTATCCCGAAAAATTTGCTCGTAT 947
BSNT_04566___ 951 TGCGAAAGCGTTCGGTATTGATACAAGCAAGATGACAACAGAAGAAGCTG 1000
.|||.||||.||.|||||||||||.|||...|||.|||||||.|||||.|
BPUM_2734___g 948 CGCGCAAGCATTTGGTATTGATACTAGCCGAATGTCAACAGAGGAAGCAG 997
BSNT_04566___ 1001 CGAAAGCATCTGTCAATTGGATGTATGATCTGGTCGAAGATTTAGAAGTG 1050
|.|||||..||||.||.||||||||||||.|.||.|||||..||||.||.
BPUM_2734___g 998 CCAAAGCTGCTGTGAACTGGATGTATGATTTAGTGGAAGACCTAGAGGTT 1047
BSNT_04566___ 1051 CCGACTTTAGAAGAGCAGGGAGTATCACCTGATATGATCGAACGCTTGTC 1100
||..|.|||||||||||.||.||||||...||.|||||.||.|||||.||
BPUM_2734___g 1048 CCTTCATTAGAAGAGCAAGGTGTATCAAAAGAGATGATTGACCGCTTATC 1097
BSNT_04566___ 1101 TAAAGAAGCTATGAAAGATCCGCAAACCTTCGGAAACCCTAGAGATTTAA 1150
|||||||||.||||||||||||||||||.|.||||||||.||||||.|||
BPUM_2734___g 1098 TAAAGAAGCAATGAAAGATCCGCAAACCATTGGAAACCCAAGAGATCTAA 1147
BSNT_04566___ 1151 ATGAAAAAGCATACAACTGGATCTACAAGCGCTGCTTTAACCTTACGCCT 1200
|.||||||||.|||||||||||.||....|||||.|||.|.||.||.|||
BPUM_2734___g 1148 ACGAAAAAGCGTACAACTGGATTTATGCTCGCTGTTTTGATCTAACACCT 1197
BSNT_04566___ 1201 AAAACGGTATAA 1212
|||||.||.|||
BPUM_2734___g 1198 AAAACAGTGTAA 1209
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