Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04482 and BPUM_2716
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence dna-align/BSNT_04482___menB.1.24716.seq
# -bsequence dna-align/BPUM_2716___menB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04482___menB-BPUM_2716___menB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04482___menB-BPUM_2716___menB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04482___menB
# 2: BPUM_2716___menB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 821
# Identity: 655/821 (79.8%)
# Similarity: 655/821 (79.8%)
# Gaps: 7/821 ( 0.9%)
# Score: 2588.0
#
#
#=======================================
BSNT_04482___ 1 ATGGC---TGAATGGAAAACAAAACGGACATACGATGAGATATTGTATGA 47
||||| |||||||.||||..|.||...|||.||.||.||.||.|||||
BPUM_2716___m 1 ATGGCTATTGAATGGCAAACTGAGCGTCAATATGACGAAATTTTATATGA 50
BSNT_04482___ 48 AACGTATAATGGCATTGCAAAAATAACAATCAACCGACCTGAGGTACATA 97
||||||.|||||.||||||||.||.||.||.||.||.||..|.|||||||
BPUM_2716___m 51 AACGTACAATGGGATTGCAAAGATTACGATTAATCGTCCACACGTACATA 100
BSNT_04482___ 98 ATGCGTTTACCCCTAAAACGGTTGCTGAAATGATTGATGCGTTTGCTGAC 147
|.||||||||.|||||.||.||...||||.|.||||||||.|||.|....
BPUM_2716___m 101 ACGCGTTTACACCTAAGACTGTGAGTGAATTAATTGATGCATTTTCGCGT 150
BSNT_04482___ 148 GCAAGAGACGACCAAAACGTTGGGGTTATCGTGCTTGCCGGTGCAGGGGA 197
||..|.||..|...|||.|||||.||.|||||.|||||.|||||.||.|.
BPUM_2716___m 151 GCTCGTGATAATTCAAATGTTGGTGTGATCGTACTTGCAGGTGCTGGCGG 200
BSNT_04482___ 198 CAAGGCATTTTGTTCTGGCGGAGACCAAAAAGTGCGCGGCCACGGTGGAT 247
|||.|||||.||||||||.||||||||||||||||||||.||.||.||.|
BPUM_2716___m 201 CAAAGCATTCTGTTCTGGTGGAGACCAAAAAGTGCGCGGTCATGGCGGTT 250
BSNT_04482___ 248 ATGTAGGAGACGACCAGATCCCGCGTCTTAACGTATTGGATCTT-CAGCG 296
||||||||||||||||.||.||||||||.||.|||.|||| ||| |||||
BPUM_2716___m 251 ATGTAGGAGACGACCAAATTCCGCGTCTAAATGTACTGGA-CTTACAGCG 299
BSNT_04482___ 297 TTTAATCCGCGTCATCCCGAAACCGGTTGTTGCGATGGTGTCCGGATATG 346
|||.||.||.|||||.||.|||||.||||||||.||||||.|.||.||||
BPUM_2716___m 300 TTTGATTCGTGTCATTCCAAAACCTGTTGTTGCAATGGTGGCTGGTTATG 349
BSNT_04482___ 347 CGATTGGCGGAGGCCATGTGCTTCACATCGTATGTGACTTGACAATTGCT 396
|.||.|||||.||.||.||.|||||.||.|||||||||.||||||||||.
BPUM_2716___m 350 CAATCGGCGGCGGACACGTTCTTCATATTGTATGTGACCTGACAATTGCA 399
BSNT_04482___ 397 GCGGACAACGCAATTTTTGGACAAACAGGCCCTAAAGTTGGAAGCTTCGA 446
||.||.||.||..|.|||||||||||.||.||.|||||.||.|||||.||
BPUM_2716___m 400 GCAGATAATGCGGTATTTGGACAAACTGGTCCAAAAGTAGGCAGCTTTGA 449
BSNT_04482___ 447 TGCAGGTTACGGTTCTGGCTACCTGGCTCGAATTGTAGGACATAAAAAAG 496
|||.|||||.|||||.||||||||.||.||.||||||||.|||||.||||
BPUM_2716___m 450 TGCTGGTTATGGTTCAGGCTACCTTGCACGTATTGTAGGTCATAAGAAAG 499
BSNT_04482___ 497 CACGTGAAATCTGGTACCTATGCCGTCAGTACAACGCACAGGAAGCACTG 546
|..|.||||||||||||.||||||||||.|||||.|||||.|||||.||.
BPUM_2716___m 500 CGAGAGAAATCTGGTACTTATGCCGTCAATACAATGCACAAGAAGCGCTT 549
BSNT_04482___ 547 GACATGGGTCTTGTCAACACAGTCGTTCCTTTGGAACAGCTTGAAGAAGA 596
||.|||||.||||||||.|||||.||.||.||.||.||||||||||||||
BPUM_2716___m 550 GATATGGGCCTTGTCAATACAGTTGTACCATTAGAGCAGCTTGAAGAAGA 599
BSNT_04482___ 597 AACGATTAAATGGTGTGAAGAAATGCTTGAAAAAAGCCCGACCGCACTGC 646
|||..|.||.||||||||.||.|||||.|||||.||||||||.||..|.|
BPUM_2716___m 600 AACAGTGAAGTGGTGTGAGGAGATGCTAGAAAAGAGCCCGACTGCTTTAC 649
BSNT_04482___ 647 GCTTTCTT-AAAGCTGCGTTTAACGCGGACACAGACGGACTTGCTGGAAT 695
| .||||| ||.|||||.|||||.||.||.||.||.|||.|.||||||||
BPUM_2716___m 650 G-ATTCTTGAAGGCTGCATTTAATGCAGATACGGATGGATTAGCTGGAAT 698
BSNT_04482___ 696 TCAGCAGTTTGCAGGGGATGCTACCCTTCTTTACTACACAACAGATGAAG 745
|||.||.||||||||.|||||.||.||||||||.||||||||||||||||
BPUM_2716___m 699 TCAACAATTTGCAGGAGATGCGACACTTCTTTATTACACAACAGATGAAG 748
BSNT_04482___ 746 CAAAAGAAGGCCGTGATTCCTTTAAGGAAAAACGCAAACCTGATTTCGGA 795
||||||||||.||.|||||||||||||||||||||||.||.||.|||||.
BPUM_2716___m 749 CAAAAGAAGGACGCGATTCCTTTAAGGAAAAACGCAAGCCGGACTTCGGT 798
BSNT_04482___ 796 CAGTTCCCTCGTTTCCCGTGA 816
||||||||.||||||||.|||
BPUM_2716___m 799 CAGTTCCCGCGTTTCCCTTGA 819
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