Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04471 and BPUM_2712

See Amino acid alignment / Visit BSNT_04471 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence dna-align/BSNT_04471___ythC.1.24716.seq
#    -bsequence dna-align/BPUM_2712.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04471___ythC-BPUM_2712.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04471___ythC-BPUM_2712.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04471___ythC
# 2: BPUM_2712
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:     116/173 (67.1%)
# Similarity:   116/173 (67.1%)
# Gaps:          28/173 (16.2%)
# Score: 402.5
# 
#
#=======================================

BSNT_04471___      1 ATGGAG-CAGAAAATTCTATGTGAGGTCAACAACTGTTCTTATTGGGGCA     49
                     || ||| ||.|||||.||.|||||.|||||.||||||||.||||||    
BPUM_2712          1 AT-GAGTCAAAAAATCCTTTGTGAAGTCAATAACTGTTCCTATTGG----     45

BSNT_04471___     50 AAGGTAACAAATGC-----ACCGCT--------GATACCATTTATGTTGT     86
                              |||||     ||||||        |||.|.||.|||||.||
BPUM_2712         46 ---------AATGCTGGAAACCGCTGTGGTGCAGATGCAATCTATGTCGT     86

BSNT_04471___     87 CAGCCATACTGGTGAAACGGCTGAAAACAGCCGGGAAACAGACTGCAAAA    136
                     ||||||.||.||..|.|||||||||||.||....|||||.||.||.||||
BPUM_2712         87 CAGCCACACAGGAAATACGGCTGAAAAAAGTGAAGAAACGGATTGTAAAA    136

BSNT_04471___    137 CGTTTAAGCCGCATGATTTATAA    159
                     |||||||.||.||.||..|.|||
BPUM_2712        137 CGTTTAAACCACAAGACCTTTAA    159


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