Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04467 and BPUM_2707
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence dna-align/BSNT_04467___ytiB.1.24716.seq
# -bsequence dna-align/BPUM_2707___ytiB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04467___ytiB-BPUM_2707___ytiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04467___ytiB-BPUM_2707___ytiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04467___ytiB
# 2: BPUM_2707___ytiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity: 410/579 (70.8%)
# Similarity: 410/579 (70.8%)
# Gaps: 30/579 ( 5.2%)
# Score: 1308.0
#
#
#=======================================
BSNT_04467___ 1 ATGAGTCTTCTAAATGATATTCTTGAATTTAA-CAAGACATTTACTGAAC 49
||||..|||.||.|.||.||..|.||||.||| |||.| |||||.||||.
BPUM_2707___y 1 ATGAAACTTTTAGAAGAAATCATCGAATATAATCAACA-ATTTATTGAAG 49
BSNT_04467___ 50 AAAGAG-AGTATGAAAAGTATCAAACATCAAAATTTCCAGATAAAAAA-A 97
||| || |.||.|||.|||.|..||||.|.||.||||||.|.|||||| .
BPUM_2707___y 50 AAA-AGAAATACGAAGAGTTTACAACAACGAAGTTTCCACAGAAAAAAGC 98
BSNT_04467___ 98 TGGCGATTCTTTCTTGCATGGACACTCGTCTGGTTGAACTGCTGCCGCAT 147
||.| |||||.||.||.|||||.||..|.||.||.||.|||||.||.|.|
BPUM_2707___y 99 TGTC-ATTCTGTCATGTATGGATACAAGACTCGTCGAGCTGCTTCCACGT 147
BSNT_04467___ 148 GCGATGAATTTGCGAAACGGTGATGTGAAAATCATTAAAAGTGCCGGTGC 197
||.|||||..||..|||.||.|||.|.||.|||.|.||||||||.|||||
BPUM_2707___y 148 GCAATGAACATGAAAAATGGAGATATCAAGATCGTCAAAAGTGCTGGTGC 197
BSNT_04467___ 198 GCTTGTGACACACCCATTCGGAAGCATCATGAGAAG---TTTACTCGTCG 244
.||||||.|.||.|||||.|||||.||.|||.|||| |||| ||.|
BPUM_2707___y 198 TCTTGTGTCTCATCCATTTGGAAGTATTATGCGAAGCATTTTA---GTGG 244
BSNT_04467___ 245 CAGTGTACGAGCTGAATGCAGATGAGGTGTGTGTGATCGGGCATCACGAT 294
|.||.|||||..|.|||||.||.|||||.|.|||.||.||.|||||.|||
BPUM_2707___y 245 CTGTTTACGAATTAAATGCTGACGAGGTTTATGTCATTGGACATCATGAT 294
BSNT_04467___ 295 TGCGGCATGAGCAAAATCAG-CAGCAAAAGCATGCTTGAAAAAATCAAAG 343
|||||.||||||||||| || .|||.||| || |||..||| |||||
BPUM_2707___y 295 TGCGGTATGAGCAAAAT-AGATAGCCAAA-CA--CTTTTAAA---CAAAG 337
BSNT_04467___ 344 CAA------GAGGGATTCCGGAAGAACGCATCGAAACAATAAAGTACTCC 387
|.| |.||.||.||.|||.||||.||.|||..|.|..|.|||||.
BPUM_2707___y 338 CCATTGAGCGGGGTATCCCAGAAAAACGGATTGAAGTACTGGAATACTCA 387
BSNT_04467___ 388 GGTGTAGACTTTGATCAATGGTTTAAAAGCTTTGATTCAGTGGAAGCGAG 437
||..|.||.|||.|.||.|||.|.|||||||||..|||.||.||||.|||
BPUM_2707___y 388 GGAATTGATTTTAAACAGTGGCTCAAAAGCTTTAGTTCGGTCGAAGAGAG 437
BSNT_04467___ 438 TGTGAAAGACAGCGTAGACGTTATTAAACATCACCCGCTGTTCCCTGAAA 487
||||||.|||||.||...||||.|.|||.|.||||||||..||||...||
BPUM_2707___y 438 TGTGAAGGACAGTGTGTCCGTTGTGAAAAACCACCCGCTCCTCCCATCAA 487
BSNT_04467___ 488 ACGTTCCGGTCCATGG-CTTAGTCATTGATCCTAAAACCGGAAAACTGGA 536
|.||.||.||.||.|| ||| ||||||||||||..|||.||.||.||.||
BPUM_2707___y 488 ATGTGCCTGTGCACGGTCTT-GTCATTGATCCTGGAACTGGCAAGCTTGA 536
BSNT_04467___ 537 TCTTA-TCGTAAACGGTTATAACAATTAA 564
|.|| ||||.|||||.|||.|.||.|||
BPUM_2707___y 537 -CGTAGTCGTTAACGGATATGAAAAGTAA 564
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