Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04441 and BPUM_2681
See
Amino acid alignment /
Visit
BSNT_04441 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence dna-align/BSNT_04441___ytqB.1.24716.seq
# -bsequence dna-align/BPUM_2681___ytqB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04441___ytqB-BPUM_2681___ytqB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04441___ytqB-BPUM_2681___ytqB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04441___ytqB
# 2: BPUM_2681___ytqB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity: 388/636 (61.0%)
# Similarity: 388/636 (61.0%)
# Gaps: 111/636 (17.5%)
# Score: 1091.0
#
#
#=======================================
BSNT_04441___ 1 ATGATTTTGAAGAAAATTCTTCCTTACAGCAAAGAACTGCT-GAAAATGG 49
|||||.|||||....||.||.||||..||.|||||.|||.| |||
BPUM_2681___y 1 ATGATCTTGAAACGCATGCTCCCTTTTAGTAAAGAGCTGTTAGAA----- 45
BSNT_04441___ 50 CCGCGGG-------AGAGGGAGATATTGTCGTAGATGCGACAATGGGCAA 92
||.| |.|.||.|||||.||..|.|||||.||.||||||||
BPUM_2681___y 46 ---CGTGCTTGTCAAAAAGGTGATATCGTTATTGATGCAACGATGGGCAA 92
BSNT_04441___ 93 CGGACATGATACACAGTTTTTAGCGGAGCTTGTCGGTGAAAACGGCCATG 142
.||.||.|||||.|..|.||||||.||.|||||||||....|.||.||.|
BPUM_2681___y 93 TGGCCACGATACTCTCTATTTAGCTGATCTTGTCGGTCCTGATGGACAAG 142
BSNT_04441___ 143 TATACGCATTCGACATCCAAGAATCAGCCGTGGCCAATACAAAGGAACGG 192
|.|.||||||||||.|.||||||..|||| |||.|
BPUM_2681___y 143 TTTTCGCATTCGACGTACAAGAAGAAGCC-------ATAGA--------- 176
BSNT_04441___ 193 CTCGGTGACATGTATCAAGC---GCGA---ACAACGTTAT---------- 226
|..||||.|||..|.|| |||| |.|.|.||||
BPUM_2681___y 177 ---GCAGACACGTAAAAGGCTTGGCGAGGGATATCCTTATGTTCATCTGA 223
BSNT_04441___ 227 TTCACAAAAGCCATGATAAAATCGCTGAATC-CCTCCCGCCTGAAACACA 275
|||||.|..|.|||||.|||.|.||| .||| |||.|| ||.|.|
BPUM_2681___y 224 TTCACGATGGTCATGAAAAACTAGCT-CATCACCTGCC------AAGAGA 266
BSNT_04441___ 276 TG-----GCAAAG-TGGCGGCCGCGGTATTTAACCTCGGCTATTTGCCGG 319
|| |.|.|| |..|.|..|||||.||||||||.||.||.|||||.|
BPUM_2681___y 267 TGTTTATGAACAGATCTCAGGTGCGGTGTTTAACCTTGGGTACTTGCCCG 316
BSNT_04441___ 320 GCGGGGACAAATCAATTACGACAAACGGCAGTTC-TACGATCA---AAGC 365
|.||.||.|||.|..|.||.||..| ||.|| |||.|.|| ||||
BPUM_2681___y 317 GAGGCGATAAAGCTGTCACTACTCA----AGCTCATACAACCATTGAAGC 362
BSNT_04441___ 366 CATTGAACAGCTTCTC----AGCATCATGAAAGACGAAGGTCTGATTGTT 411
||||.|.|||||.||| .|| |.|||..||.|||||||||.||.
BPUM_2681___y 363 CATTAAGCAGCTCCTCGACTGGC----TTAAACCCGGAGGTCTGATCGTC 408
BSNT_04441___ 412 CTCGTCGTCTATCATGGCCACCCGGAAGGCAAAGCTGAAAAAAACGACGT 461
||.||..||||||||||.|||||.|||||.|||...|||||| ||.||
BPUM_2681___y 409 CTTGTGATCTATCATGGACACCCTGAAGGGAAAAGAGAAAAA---GAAGT 455
BSNT_04441___ 462 G---CTCGAGTTTTGCCG-GGACTT-----GGACCAG---CAATCAGCCC 499
| |||||.|.||||.| ..|||| .||..|| |||
BPUM_2681___y 456 GCTTCTCGACTATTGCAGATCACTTTCTCATGAAAAGGTACAA------- 498
BSNT_04441___ 500 GTGTATTAACATACGGATTTATCAATCAGCAAAATGACCCGCCATTTATT 549
||.|||.||||...||..||.|||...|||||.||||||||.|||.|.
BPUM_2681___y 499 --GTTTTATCATATCAATACATGAATATTCAAAACGACCCGCCTTTTGTG 546
BSNT_04441___ 550 GTCGCCATCGAAAAAAAAGCTCAGATCAGCAAATGA 585
|||||.||.| ||||||||||||.||| |.||
BPUM_2681___y 547 GTCGCTATTG-AAAAAAAGCTCAAATC--CTAA--- 576
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.