Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04439 and BPUM_2679
See
Amino acid alignment /
Visit
BSNT_04439 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence dna-align/BSNT_04439___ytzC.1.24716.seq
# -bsequence dna-align/BPUM_2679___ytzC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04439___ytzC-BPUM_2679___ytzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04439___ytzC-BPUM_2679___ytzC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04439___ytzC
# 2: BPUM_2679___ytzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 177/340 (52.1%)
# Similarity: 177/340 (52.1%)
# Gaps: 107/340 (31.5%)
# Score: 498.0
#
#
#=======================================
BSNT_04439___ 1 ------------------------GTGGCAACAAGACAATCAGTAGATGA 26
.||||||||||.||.|||.|.|||||
BPUM_2679___y 1 ATGATGAAATGGAGGGAATGCCGGATGGCAACAAGGCAGTCAATCGATGA 50
BSNT_04439___ 27 ACATCTCCAGCAATGTA-TGCAGGCCTATGATTATGCTGAAGAAC-AGCT 74
|..|.||||..||.||| ||.|..||| |||.|.||| .||| |||
BPUM_2679___y 51 ATTTATCCAAAAAAGTACTGAAACCCT-TGAGTTTGC----AAACGAGC- 94
BSNT_04439___ 75 GAAAATCGCTTCTAAA-------CAAGAGCATTATAACGATCAAGAATAT 117
||.|.|.|| |.|| |||||||||||||||||..|.||||.|
BPUM_2679___y 95 --AATTTGATT-TGAACTTACGCCAAGAGCATTATAACGAGGACGAATTT 141
BSNT_04439___ 118 ----AGTGATGCGCAAATGCAGCTT------GAAGATGCGGTAAATGCCT 157
|| ||| |||||| |||||||||||.||.|..|
BPUM_2679___y 142 TCTAAG------GCA----CAGCTTATGCTCGAAGATGCGGTGAACGAAT 181
BSNT_04439___ 158 T-GAATAAGCTATGGCTGTCGTCAAATGATCAGCAGAGAGAACAGCTGTA 206
| |||.||...|.||.||||| |.|||||.|||||.|||||.|.|.|..|
BPUM_2679___y 182 TAGAAAAATTAAAGGATGTCG-CCAATGACCAGCAAAGAGAGCGGTTAGA 230
BSNT_04439___ 207 CAGAATGAGGCTTCAGCTTCAATCTTTGCAAAATAATATGATCCTGCAGC 256
||||..|.|..||||..|||||...|||||||||.|.|||||
BPUM_2679___y 231 CAGAGCGCGTGTTCAAATTCAAAGCTTGCAAAATCAAATGAT-------- 272
BSNT_04439___ 257 ACCCTCTTGATGTGTAG----------------------- 273
|.|||
BPUM_2679___y 273 ------------TTTAGGTATTTCTTACGACAACGAATGA 300
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.