Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04389 and BPUM_2660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence dna-align/BSNT_04389.1.24716.seq
# -bsequence dna-align/BPUM_2660___lplBA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04389-BPUM_2660___lplBA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04389-BPUM_2660___lplBA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04389
# 2: BPUM_2660___lplBA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 985
# Identity: 747/985 (75.8%)
# Similarity: 747/985 (75.8%)
# Gaps: 38/985 ( 3.9%)
# Score: 2754.5
#
#
#=======================================
BSNT_04389 1 ATGAAAACAGCAGAA-------GCGCAAGCGCCGGCTGT---TGATGCAG 40
|||||||||| ||.| || ||| ||.||| ||..||||
BPUM_2660___l 1 ATGAAAACAG-AGGATGTCACTGC-CAA-----GGGTGTGCCTGCGGCAG 43
BSNT_04389 41 TCATTTTTAAAAAAGAAAAAAGAAAGCGCTTAC-TAAGCAA--GCTGAAT 87
.|||.|||||||||||.||||||||||||| |||.||| |||.|.|
BPUM_2660___l 44 ---CTTTGAAAAAAGAAAATAGAAAGCGCTTACTTAATCAAATGCTTAGT 90
BSNT_04389 88 CAGCAAAAATATTTGTACTTGATGATTTTGCCGGGGTGTATTTATTTT-T 136
|||||.|.||||||..|.||||||||.||.|||...||||||||| |
BPUM_2660___l 91 ---CAAAAGTTTTTGTATCTCATGATTTTACCAGGGCTCATTTATTTTCT 137
BSNT_04389 137 TGCTTTTTAAGTATGTTCCGATGTGGGGAATTGTGATTGCGTTTCAGGAT 186
|| |.|||||.|||||.|||||||||||..|..|.|||||.|||||.|||
BPUM_2660___l 138 TG-TCTTTAAATATGTGCCGATGTGGGGGCTGATCATTGCCTTTCAAGAT 186
BSNT_04389 187 TATCAGCCGTTCCTCGGCATTTTGGGCAGTGAGTGGGTGGGGCTGAAGCA 236
||.||||||||.|||||.|||.|.||||||||||||||.||..|.||.||
BPUM_2660___l 187 TACCAGCCGTTTCTCGGTATTCTTGGCAGTGAGTGGGTTGGCTTCAAACA 236
BSNT_04389 237 TTTTATCAGGCTGTTTACTGAGCCTACATTTTTTCTCTTGTTAAAAAACA 286
.|||||..|..|||||||.||.||.||||||||..||||.||||||||.|
BPUM_2660___l 237 CTTTATTCGCTTGTTTACAGAACCAACATTTTTCATCTTATTAAAAAATA 286
BSNT_04389 287 CGCTCGTGTTATTTGCTTTGAACCTGGCCATATTTTTCCCGGTGCCGATA 336
|.||..|.||||||||..||||..|.|..||.||.||.||..|.||.||.
BPUM_2660___l 287 CACTGATTTTATTTGCCATGAATGTCGTGATTTTCTTTCCAATTCCAATC 336
BSNT_04389 337 CTGCTGGC---GCTTTTATTGAACGAAGTGCGGATT-GCTCTCTTTAAAA 382
.|..|||| ||||||| ||.||.|| |.|||| ||..|.|||||.|
BPUM_2660___l 337 TTATTGGCCCTGCTTTTA---AATGAGGT-CAGATTGGCATTGTTTAAGA 382
BSNT_04389 383 AATTTGTTCAGACGCTGATTTATATCCCGCATTTTATGTCTTGGGTCATT 432
||||||||||||||.||||.||.||.||.||.||.|||||.|||||.|||
BPUM_2660___l 383 AATTTGTTCAGACGATGATATACATTCCTCACTTCATGTCATGGGTGATT 432
BSNT_04389 433 GTTGTATCACTT-TCGTTTGTGCTGTTAACGGTAGACGGAGGCTTGATTA 481
||.||.|| ||| ||.|||||..|||||||.|||||.||.||.||.||.|
BPUM_2660___l 433 GTCGTGTC-CTTATCCTTTGTTTTGTTAACAGTAGATGGCGGATTAATCA 481
BSNT_04389 482 ATGAACTGATTGTGTTTTTTGGCGGTGAAAAAATCAATTTTCTGCTGAAC 531
|||||.||||||..||.|||||.||.|||||.||.||.||.||.||.|..
BPUM_2660___l 482 ATGAATTGATTGCTTTCTTTGGAGGGGAAAAGATTAACTTCCTTCTTAGT 531
BSNT_04389 532 GAAGAATGGTTCCGGCCCCTGTATATTCTGCAGGTTATCTGGAGGGAAGC 581
.|.|||||||||.||||..||||.|||.|.||.||.||||||.|.|||||
BPUM_2660___l 532 CAGGAATGGTTCAGGCCGATGTACATTTTACAAGTGATCTGGCGAGAAGC 581
BSNT_04389 582 GGGCTGGTCGACGATCATTTATCTGGCGGCCATTACAGCGGTTGACCCCC 631
.||||||||||||||||||||.||.|||||.|||||||||||.||.||.|
BPUM_2660___l 582 AGGCTGGTCGACGATCATTTACCTTGCGGCGATTACAGCGGTAGATCCGC 631
BSNT_04389 632 AGCTGTATGAAGCGGCGAAAATGGACGGAGCGGGACGGCTGCGGCAAATG 681
||||.||||||||.|||||||||||.|||||.||..|.|||.|.||||||
BPUM_2660___l 632 AGCTCTATGAAGCAGCGAAAATGGATGGAGCCGGCAGACTGAGACAAATG 681
BSNT_04389 682 TGGCATATTACGCTTCCCGCCATTAAAAGCGTTATCGTCGTTTTGCTGAT 731
||||||||.||||||||.|||||||||||.||.||.||||||.|.||.||
BPUM_2660___l 682 TGGCATATCACGCTTCCTGCCATTAAAAGTGTGATTGTCGTTCTACTAAT 731
BSNT_04389 732 TTTGAAAATCGGAGACACGCTGGAGCTTGGCTTCGAGCATGTGTATTTGC 781
|||||||||.||.|||||..|.|||||||||||.||||||||.||.||..
BPUM_2660___l 732 TTTGAAAATTGGTGACACATTAGAGCTTGGCTTTGAGCATGTCTACTTAT 781
BSNT_04389 782 TGTTAAATGCGACTAACAGGGAAGTGGCGGAAATTTTTGATACGTATGTT 831
|..|.|||||.||.|||.|.|||||.||.|||||.|||||||||||.|||
BPUM_2660___l 782 TACTCAATGCAACGAACCGAGAAGTAGCAGAAATCTTTGATACGTACGTT 831
BSNT_04389 832 TATACTGCAGGGCTGAAACAGGGCCAATTCAGCTACAGTACAGCAGTCGG 881
|||||.||.||.||.||.||.||.|||||.|||||.|||||.||.||.||
BPUM_2660___l 832 TATACAGCTGGTCTTAAGCAAGGGCAATTTAGCTATAGTACCGCTGTTGG 881
BSNT_04389 882 CGTATTTAAAGCGGCGGTCGGGCTGATTTTGGTCATGCTAGCGAATCGTT 931
..||||||||||.||.||.||.||.||||||||.|||||.|||||.||||
BPUM_2660___l 882 TCTATTTAAAGCAGCTGTTGGACTCATTTTGGTTATGCTTGCGAACCGTT 931
BSNT_04389 932 TGGCGAAGAAATTTGGCGAGGAAGGAATTTATTAA 966
|.||||||||||||||.||.|||||.||.||.|||
BPUM_2660___l 932 TAGCGAAGAAATTTGGGGAAGAAGGTATCTACTAA 966
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