Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04413 and BPUM_2655

See Amino acid alignment / Visit BSNT_04413 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence dna-align/BSNT_04413.1.24716.seq
#    -bsequence dna-align/BPUM_2655___ytwF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04413-BPUM_2655___ytwF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04413-BPUM_2655___ytwF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04413
# 2: BPUM_2655___ytwF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity:     210/323 (65.0%)
# Similarity:   210/323 (65.0%)
# Gaps:          22/323 ( 6.8%)
# Score: 592.0
# 
#
#=======================================

BSNT_04413         1 TTGGAAATAAAAGAAATCAGCACAGCCGCTTTGAAAGAAAAAATTGAGGC     50
                     .||..|.|.|||||||||...|.||..|..||.|||.||||..|.|||..
BPUM_2655___y      1 GTGTCAGTTAAAGAAATCTCAATAGAAGAATTAAAACAAAAGCTAGAGCA     50

BSNT_04413        51 GGACGAA--GAATTATATTTAATTGATGTCAGAGAAGATGAAGAGGTAGC     98
                     .||.|||  ||.|.|..||  .||||.||..|.||..|.||.||.|||||
BPUM_2655___y     51 AGAAGAAGCGATTCAGCTT--GTTGACGTGCGTGAGAACGAGGAAGTAGC     98

BSNT_04413        99 GGAAGGCATGATCCCGCAAGCCGTTCATATTCGCATGGGGGATATTCCTG    148
                     .|||||.|||||.||.|||||..|.||.|||||.|||||.|||||.||||
BPUM_2655___y     99 AGAAGGAATGATTCCTCAAGCGATCCACATTCGAATGGGAGATATCCCTG    148

BSNT_04413       149 AAAAAATGGAAACCCTTGATAAAGAC-AAAGAGTACGTAT-TTATCTGCC    196
                     |.|||.||||..|..|.|||.|| || .||||.|| .||| ||||.||||
BPUM_2655___y    149 AGAAACTGGATGCATTCGATCAA-ACGCAAGAATA-TTATATTATTTGCC    196

BSNT_04413       197 GCTCAGGAATGCGCAGCATG--AACGTCTGCAAGTACCTGGATGAGCAAG    244
                     |.||.||.|..||.||  ||  ||.|||||..|.|.|||.||.||.||||
BPUM_2655___y    197 GGTCTGGTAAACGTAG--TGAAAATGTCTGTTATTTCCTAGAAGACCAAG    244

BSNT_04413       245 GCTTTAAAACAGTCAATGTTGAAGGCGGCATGATGGCATGGGAAGGCGAA    294
                     |||.|.||.|...||||||.|..|||||.|||.|.||.|||...||.|||
BPUM_2655___y    245 GCTATCAAGCGACCAATGTCGTTGGCGGAATGCTTGCTTGGACTGGAGAA    294

BSNT_04413       295 ACAAAACCAAA-----AAACTAG    312
                     ||||||||.||     ||     
BPUM_2655___y    295 ACAAAACCGAAGCTGTAA-----    312


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