Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04382 and BPUM_2654
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence dna-align/BSNT_04382___yteV.1.24716.seq
# -bsequence dna-align/BPUM_2654___yteV.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04382___yteV-BPUM_2654___yteV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04382___yteV-BPUM_2654___yteV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04382___yteV
# 2: BPUM_2654___yteV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 138/201 (68.7%)
# Similarity: 138/201 (68.7%)
# Gaps: 27/201 (13.4%)
# Score: 491.0
#
#
#=======================================
BSNT_04382___ 1 ---------ATGCTGAAGGTAGCGGTATTTGATGAAGAGCATGAAAAAGA 41
.||||.||||||||.|||||||||||||||||.||||||||
BPUM_2654___y 1 GTGGCATATGTGCTAAAGGTAGCTGTATTTGATGAAGAGCACGAAAAAGA 50
BSNT_04382___ 42 CTTACAGACGGAAATCAATTCATTTTTAAAAGGGAT--ATCGGAGGAGCA 89
.||.||||..|||||||||...|||||||||||.|| || ||.||.||
BPUM_2654___y 51 TTTGCAGAGCGAAATCAATCTTTTTTTAAAAGGAATGGAT--GACGACCA 98
BSNT_04382___ 90 GCTGATTGATATCAAATATACGGTTTCGG----CCGCGTGCGACCCAGAC 135
..|.|||||.|||||.||.|..||..||| | ||.||.|.||..
BPUM_2654___y 99 AATCATTGACATCAAGTACAATGTAGCGGTGATC----TGTGAGCAAGGT 144
BSNT_04382___ 136 GGCGAGCAGCTTTACTGTTTTTCCGCCCTTATTTTATATCGCAAATAA-- 183
||.||.|||||.|||||||||||.||.||.||||||||| |||.||
BPUM_2654___y 145 GGAGAACAGCTCTACTGTTTTTCTGCACTCATTTTATAT---AAAAAATA 191
BSNT_04382___ 183 - 183
BPUM_2654___y 192 G 192
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