Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04358 and BPUM_2637
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence dna-align/BSNT_04358___trmB.1.24716.seq
# -bsequence dna-align/BPUM_2637___trmB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04358___trmB-BPUM_2637___trmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04358___trmB-BPUM_2637___trmB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04358___trmB
# 2: BPUM_2637___trmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 662
# Identity: 467/662 (70.5%)
# Similarity: 467/662 (70.5%)
# Gaps: 40/662 ( 6.0%)
# Score: 1533.5
#
#
#=======================================
BSNT_04358___ 1 ATGAGAATGCGCCACAAGCCTTGGGCTGATGACTTTTTGGCTGAAAACGC 50
.||||||||||.||.||.||.|||||||||||.|..||.||||||||.||
BPUM_2637___t 1 TTGAGAATGCGACATAAACCATGGGCTGATGATTACTTAGCTGAAAATGC 50
BSNT_04358___ 51 AGATATTTCCATCAGC-AATCCTGCTGATTATAAAGGGAAATGGAACA-C 98
..|||||.|| |.||| ||.||.|...|.|||||||||||.||| || .
BPUM_2637___t 51 TCATATTGCC-TTAGCGAACCCCGAGCAATATAAAGGGAAGTGG--CATG 97
BSNT_04358___ 99 AG-TGTTTGGCAACGACAATCCGATCCATATCGAGGTTGGTACAGGAAAA 147
|| |||||||.||.||..||||.|||||||||||.|||||.|||||.|||
BPUM_2637___t 98 AGCTGTTTGGAAATGATCATCCAATCCATATCGAAGTTGGCACAGGGAAA 147
BSNT_04358___ 148 GGCCAATTTATTTCTGGTATGGCCAAACAAAATCCCGACATCAATTATAT 197
||....|||||..||||.||||.|||.|...||||.||.|||||.|||||
BPUM_2637___t 148 GGGAGCTTTATCGCTGGCATGGGCAAGCTTCATCCTGATATCAACTATAT 197
BSNT_04358___ 198 TGGTATTGAGTTATTTAAAAGCGTCATCGTGACAGCCGTCCAAAAAGTAA 247
|||.|||||.|||||||||||.||.||.||||||||.||..|.|||.|.|
BPUM_2637___t 198 TGGCATTGAATTATTTAAAAGTGTTATTGTGACAGCAGTAGACAAAATCA 247
BSNT_04358___ 248 AAGACAGCGAAGCGCAGAATGTAAAGCTTCTGAATATAGATGCGGACACG 297
||||.|..||.|...|.||||||||||||.||||.||..|||||||.|||
BPUM_2637___t 248 AAGAGACAGATGTTGAAAATGTAAAGCTTTTGAACATTAATGCGGAAACG 297
BSNT_04358___ 298 CTGACGGATGTGTTTGAGCCGGGGGAAGTGA-----AACGGGTCTACTTG 342
|||||.||||||||| |..|.||.||| |.|||||.||..||
BPUM_2637___t 298 CTGACAGATGTGTTT-----GCTGAAAATGAGATTGACCGGGTGTATCTG 342
BSNT_04358___ 343 AACTTTTCTGATCCTTGGCC-GAAGAAACGGCATGAAAAACGCCGCCTGA 391
||.||.||||||||.||||| .|||.|| ||||||||||.|||.|..|||
BPUM_2637___t 343 AATTTCTCTGATCCGTGGCCAAAAGCAA-GGCATGAAAAGCGCAGATTGA 391
BSNT_04358___ 392 CATATTCCCA----CTTCCTCAAAAAATATGAAGAAGTAAT----GGGCA 433
|.|.| | |||..|..|...|||||||.| ||.| |..|
BPUM_2637___t 392 CGTTT----AAGGCCTTTTTAGAGCGATATGAACA--TATTCTCCGTCC- 434
BSNT_04358___ 434 AAGGCGGATCGATTCATTTTAAAACGGACAACCGAGGTTTGTTTGAGTAC 483
||||||...|.|.|||||.|||||.||||||||.||.||.|||||.||.
BPUM_2637___t 435 -AGGCGGTGAGTTGCATTTCAAAACAGACAACCGCGGGTTATTTGAATAT 483
BSNT_04358___ 484 TCTTTGAAGAGCTTCTCTGAGTACGGCCTCCTGCTGACATACGTCAGCCT 533
||.||.||||||||.||||..||.|||||.||..|.||.||.||.|||.|
BPUM_2637___t 484 TCCTTAAAGAGCTTTTCTGCATATGGCCTTCTTTTAACGTATGTAAGCTT 533
BSNT_04358___ 534 CGATTTGCATAACAGCAATCTCGAAGGCAATATTATGACAGAATATGAAG 583
.|||||.|||||...|...||.|||||.|||.|.|||||.|||||.||||
BPUM_2637___t 534 AGATTTACATAAGGACGGACTAGAAGGAAATGTGATGACGGAATACGAAG 583
BSNT_04358___ 584 AAAAATTCTCTGCACTCGGCCAGCCGATCTATCGGGCTGAGGTTGAA--- 630
|.||||||||..|..|.||.||.||.||||||||..|.||.| ||||
BPUM_2637___t 584 AGAAATTCTCGTCTATGGGACAACCTATCTATCGATCAGAAG-TGAAATT 632
BSNT_04358___ 631 TGGAGAACGTAA 642
|..|||| |||
BPUM_2637___t 633 TCCAGAA--TAA 642
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