Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04352 and BPUM_2634

See Amino acid alignment / Visit BSNT_04352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence dna-align/BSNT_04352___ytzB.1.24716.seq
#    -bsequence dna-align/BPUM_2634___ytzB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04352___ytzB-BPUM_2634___ytzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04352___ytzB-BPUM_2634___ytzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04352___ytzB
# 2: BPUM_2634___ytzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     225/335 (67.2%)
# Similarity:   225/335 (67.2%)
# Gaps:          37/335 (11.0%)
# Score: 700.5
# 
#
#=======================================

BSNT_04352___      1 TTGAAATTGCGTCATCTTCTTTTAGGAGC-AGGACTTGGAATTTGT-GCG     48
                     |||||.||....|||.||||..|.||.|| ||.| ||||    .|| ||.
BPUM_2634___y      1 TTGAAGTTAAAACATGTTCTGATTGGTGCGAGTA-TTGG----CGTAGCC     45

BSNT_04352___     49 GCTGTCGTTGT------GAAACAATATGTGATGAAGCCT---TATATTTC     89
                     ||||...||||      ||||..||.|.|      .|||   |||||.||
BPUM_2634___y     46 GCTGCAATTGTTGCAAAGAAAGTATTTTT------CCCTACGTATATCTC     89

BSNT_04352___     90 TTCAGAAAAAGCGCTTCGAATTGTAAAATCTGCTTTTAAGCAGCGGGGCC    139
                     .||.||||||||..|...||||||.|||||.||||||||.|||||.||||
BPUM_2634___y     90 GTCTGAAAAAGCATTAAAAATTGTGAAATCCGCTTTTAAACAGCGCGGCC    139

BSNT_04352___    140 CGATTGACGGATCATGGATTTACAC----CCAG--CCGGAGCCTTACAAT    183
                     |||||||.||.||.||||||||.||    ||||  |||.|    |||..|
BPUM_2634___y    140 CGATTGATGGCTCTTGGATTTATACTGTACCAGAACCGTA----TACCGT    185

BSNT_04352___    184 ATTAACGGAGAAACGGTACAGGTATACAAAACCGGCATTACACGATCAGC    233
                     |  ||.||.||||||.|..|.||.||||||.|.||.|||||.||.|||||
BPUM_2634___y    186 A--AATGGTGAAACGATTGATGTGTACAAATCTGGTATTACTCGCTCAGC    233

BSNT_04352___    234 TTTCGGAGAATTAGAACAGTATGAAGTCATGGTGGATGCGAAAACGGGAG    283
                     .||.||.||..|.||||||||.|||||||||.|.|||||.|||||.||..
BPUM_2634___y    234 ATTTGGCGAGCTTGAACAGTACGAAGTCATGATTGATGCCAAAACAGGCA    283

BSNT_04352___    284 AAATTGTTGATGTCATTGATACAATCGCCTCTTAA    318
                     ..|||||.||||||||||||.|..|.|   |||.|
BPUM_2634___y    284 TGATTGTGGATGTCATTGATTCTGTGG---CTTGA    315


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