Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04348 and BPUM_2632
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:53
# Commandline: needle
# -asequence dna-align/BSNT_04348___ytoQ.1.24716.seq
# -bsequence dna-align/BPUM_2632___ytoQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04348___ytoQ-BPUM_2632___ytoQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04348___ytoQ-BPUM_2632___ytoQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04348___ytoQ
# 2: BPUM_2632___ytoQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 449
# Identity: 338/449 (75.3%)
# Similarity: 338/449 (75.3%)
# Gaps: 4/449 ( 0.9%)
# Score: 1222.0
#
#
#=======================================
BSNT_04348___ 1 ATGGAGTTTATCGTCTATTTAGCAGGAGAAATCCACAGCAATTGGCGCGA 50
|||.|.||.|..||||||||||||||||||||.||.|||.|.|||||.||
BPUM_2632___y 1 ATGCAATTAACTGTCTATTTAGCAGGAGAAATTCATAGCCAGTGGCGTGA 50
BSNT_04348___ 51 GGAAATTAAAGAAAAAACAAAATCACTGAAGCTCCCGATTACGTTTGTTG 100
.|||||.||.||.||||...||||..||||.||.||..|.||.|||||.|
BPUM_2632___y 51 TGAAATCAAGGAGAAAAGCCAATCGTTGAAACTGCCAGTGACATTTGTAG 100
BSNT_04348___ 101 GCCCGATGGAGAATCATGACCGCTCAGACAATATTGGTGAAGAAATTATG 150
|.||.||||||||||||||||||||.||..|.||||||||.||.|||.|.
BPUM_2632___y 101 GTCCAATGGAGAATCATGACCGCTCCGATCACATTGGTGAGGACATTTTA 150
BSNT_04348___ 151 GGCGTACAGCCAAATGCCGTTTTAAAGGATGACAAAGCCTCTGACATCAA 200
||.|.||||||.||||||.||||.||.|||||....||.|||||..|.||
BPUM_2632___y 151 GGTGAACAGCCGAATGCCATTTTCAAAGATGATGCTGCTTCTGATTTGAA 200
BSNT_04348___ 201 CAACTTCAGAACCGCCGTCCTGATGAATAAAG-CAGACTTTGTGATCGCC 249
|||.||..|.||.|...|||| ||.||..||| |||||.|.||.||.|||
BPUM_2632___y 201 CAATTTTCGTACTGAGATCCT-ATTAAACAAGTCAGACATCGTCATTGCC 249
BSNT_04348___ 250 CTGTTTGGCGAAAAGTACAAACAGTGGAACACGGCAATGGATGCATCATA 299
|..|||||.||.||.||.|||||||||||||||||||||||||||||...
BPUM_2632___y 250 CGCTTTGGTGAGAAATATAAACAGTGGAACACGGCAATGGATGCATCTGC 299
BSNT_04348___ 300 TGCGATCGCAAAAGGAAAACCCCTGATTATCATCCGGCCGGAATCGCTCC 349
|||.||.||.|||||.|||||.||.|||.|.|||||.||..||...||.|
BPUM_2632___y 300 TGCCATTGCGAAAGGGAAACCTCTCATTTTGATCCGTCCAAAAGAACTGC 349
BSNT_04348___ 350 ACCATCCTTTAAAAGAGCTTTCCAATAAAGCGAATATTACGGTTGAAACC 399
|||||||..||||.|||||.||.||||||||||||||.||.||.||||||
BPUM_2632___y 350 ACCATCCACTAAAGGAGCTATCAAATAAAGCGAATATCACTGTAGAAACC 399
BSNT_04348___ 400 GTTAACCAAGCCATTAAGGCCCTTTCCTATCTATTTGAAACAG-AATAA 447
||.||||||||.||.|||||..|.||.||..|.|||| ||||| |||||
BPUM_2632___y 400 GTGAACCAAGCAATCAAGGCGTTATCTTACGTGTTTG-AACAGCAATAA 447
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