Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04346 and BPUM_2630

See Amino acid alignment / Visit BSNT_04346 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence dna-align/BSNT_04346___ytpP.1.24716.seq
#    -bsequence dna-align/BPUM_2630___ytpP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04346___ytpP-BPUM_2630___ytpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04346___ytpP-BPUM_2630___ytpP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04346___ytpP
# 2: BPUM_2630___ytpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity:     239/325 (73.5%)
# Similarity:   239/325 (73.5%)
# Gaps:           5/325 ( 1.5%)
# Score: 840.0
# 
#
#=======================================

BSNT_04346___      1 ATGAAAAAAATTGAATCAACTCAAGAGCTGGAAAAAGCGGTAAAGGATGA     50
                     |||||||||||||||||||...||||..|..||||||.|.|..|.||.||
BPUM_2630___y      1 ATGAAAAAAATTGAATCAAACGAAGAATTACAAAAAGTGATTCAAGAAGA     50

BSNT_04346___     51 TTGGTCTGTATTTATGTTTTCAGCCGATTGGTGCCCGGATTGCCGTTTTG    100
                     .|...|.|||.|..|.||||||||.||.||||||||.||.|||..||||.
BPUM_2630___y     51 CTTAACCGTACTGCTATTTTCAGCGGACTGGTGCCCAGACTGCACTTTTA    100

BSNT_04346___    101 TAGAGCCTTTCCTGCCTGAATTGGAAGCGAATTTCCCTGAATTCACCTAC    150
                     |.||.||.|||.||||.||..|.|||||.||.|.|||.|||||....|||
BPUM_2630___y    101 TCGAACCATTCTTGCCAGAGCTTGAAGCAAACTACCCAGAATTTGAGTAC    150

BSNT_04346___    151 TACTACGTAGACCGTGACAAATTCATTGATACATGTGCAGAGTGGGAAAT    200
                     |..||.||.||..|.||..||||.||||||||.||.||||||||||||||
BPUM_2630___y    151 TTTTATGTGGATAGAGATCAATTTATTGATACTTGCGCAGAGTGGGAAAT    200

BSNT_04346___    201 TTACGGAATCCCAAGCTTTGTGGTGTTTAATGAAGGAAAAGAAGTAAATC    250
                     ||||||.||.|||||||||.|.||.|||||..|.|||.||||..|.||.|
BPUM_2630___y    201 TTACGGCATTCCAAGCTTTTTAGTATTTAAAAATGGACAAGAGATTAACC    250

BSNT_04346___    251 GTTTTGTGAGCAAAGACCGCAAAACAAAAGAAGAAATTGAA-CAGTTTTT    299
                     |.|||||.|||||.||.||.|||||.||.|||||.|||||| || |||||
BPUM_2630___y    251 GCTTTGTCAGCAAGGATCGTAAAACGAAGGAAGAGATTGAAGCA-TTTTT    299

BSNT_04346___    300 AACAGACTCTCTCGCTAAAGCGTAA    324
                     ||||||.|||||..|||||   |||
BPUM_2630___y    300 AACAGATTCTCTTTCTAAA---TAA    321


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