Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04340 and BPUM_2626

See Amino acid alignment / Visit BSNT_04340 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence dna-align/BSNT_04340___murC.1.24716.seq
#    -bsequence dna-align/BPUM_2626___murC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04340___murC-BPUM_2626___murC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04340___murC-BPUM_2626___murC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04340___murC
# 2: BPUM_2626___murC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1321
# Identity:    1003/1321 (75.9%)
# Similarity:  1003/1321 (75.9%)
# Gaps:          44/1321 ( 3.3%)
# Score: 3707.0
# 
#
#=======================================

BSNT_04340___      1 ATGACTGTTTATCATTTTGTTGGAATAAAAGGGACCGGTATGAGTCCGCT     50
                     |||||||||||||||||||||||||||||||||||.|||||||||||.||
BPUM_2626___m      1 ATGACTGTTTATCATTTTGTTGGAATAAAAGGGACAGGTATGAGTCCACT     50

BSNT_04340___     51 TGCCCAAATACTTCATGATAATGGATATACTGTCCAAGGATCGGATATCG    100
                     .||||||||.||||||||||.|||.|||||||||||||||||||||||||
BPUM_2626___m     51 GGCCCAAATTCTTCATGATACTGGGTATACTGTCCAAGGATCGGATATCG    100

BSNT_04340___    101 AAAAATTTATTTTTACGCAAACAGCGCTTGAAAAAAGAAATATTACGATT    150
                     |||||..|||.|||||.||||.|||..|.|||.||.|||||||||..|||
BPUM_2626___m    101 AAAAACATATCTTTACACAAAAAGCATTAGAAGAACGAAATATTAAAATT    150

BSNT_04340___    151 CTTCCTTTTAGCGCGGAAAATATTAAACCCGGCATGACAGTCATCGCCGG    200
                     |||||.|||..|.|.||.||||||.|.||.||.|||||.|||||.||.||
BPUM_2626___m    151 CTTCCATTTGACCCAGATAATATTCAGCCAGGGATGACCGTCATTGCAGG    200

BSNT_04340___    201 AAACGCATTCCCAGACACGCATCCTGAAATAGAAAAAGCGATGTCTGAGG    250
                     .||.|||||.||.||.||.||.|||||.||.|||...||..|.|||||.|
BPUM_2626___m    201 TAATGCATTTCCTGATACACACCCTGAGATTGAACGTGCCCTTTCTGAAG    250

BSNT_04340___    251 GAATTCCGGTGATACGTTATCATAAGTTTTTAGGCGACTACATGAAAAAA    300
                     |.|||||.||.||.|||||.|||||.||..|.||.||.||||||.|...|
BPUM_2626___m    251 GGATTCCTGTCATTCGTTACCATAAATTCCTTGGAGAATACATGGATTCA    300

BSNT_04340___    301 TTCACGAGTGTTGCCGTTACGGGCGCACACGGCAAAACGTCGACTACGGG    350
                     |||||.|..|||||..||||.||.||.||.||.||||||||.||.||.||
BPUM_2626___m    301 TTCACAAACGTTGCGATTACTGGTGCTCATGGTAAAACGTCAACAACAGG    350

BSNT_04340___    351 TCTGCTGGCTCACGTGATCCAAAACGCAAAACCGACGTCTTTCTTAATCG    400
                     .|||||.||.||.|||||.|||...||.|||||.||.||.|.||||||||
BPUM_2626___m    351 ACTGCTTGCCCATGTGATGCAATCAGCGAAACCAACTTCATACTTAATCG    400

BSNT_04340___    401 GAGACGGAACAGGCCAGGGAAATGAAAACAGCGAATACTTTGTGTTTGAA    450
                     |.||.|||.|.||...|||.||.|||||||||||.||.|||||.||||||
BPUM_2626___m    401 GCGATGGATCTGGTATGGGGAAAGAAAACAGCGAGTATTTTGTATTTGAA    450

BSNT_04340___    451 GCGTGCGAATACCGCCGCCATTTCTTAAGCTATCAGCCAGATTATGCGAT    500
                     ||.||||||||||||.|.||.|||.|.||||||||.|||||.||||||||
BPUM_2626___m    451 GCATGCGAATACCGCAGACACTTCCTCAGCTATCATCCAGACTATGCGAT    500

BSNT_04340___    501 TATGACGAATATTGATTTTGATCATCCTGATTACTTCTCAAGCATTGACG    550
                     .|||||.||||||||||||||||||||||||||.||||||..||||||||
BPUM_2626___m    501 CATGACCAATATTGATTTTGATCATCCTGATTATTTCTCAGACATTGACG    550

BSNT_04340___    551 ATGTATTTGACGCTTTCCAAGAGATGGCTCTTCAGGTCAACAAAGGCATT    600
                     |.||.|||||.||.||.|||.|.|||||.|||||.||.||.||||.||||
BPUM_2626___m    551 ACGTGTTTGATGCGTTTCAAAACATGGCACTTCAAGTAAAAAAAGCCATT    600

BSNT_04340___    601 ATTGCCTGCGGAGACGATGAGCATCTGCCGAAAATCCATGCGAACGTCCC    650
                     ||.||.|||||.||.||||||||||||||.||.||.||.|||||.||.||
BPUM_2626___m    601 ATCGCTTGCGGTGATGATGAGCATCTGCCTAAGATTCAAGCGAAGGTACC    650

BSNT_04340___    651 GGTTGTGTATTACGG---CACGGGGGAAGAAAATGATTTTCAAGCCAGAA    697
                     .||||||||.|||||   ||   ..||||||||||||||.|||||..|.|
BPUM_2626___m    651 TGTTGTGTACTACGGTTTCA---ATGAAGAAAATGATTTCCAAGCACGTA    697

BSNT_04340___    698 ACATCGTAAAAAGCACGGAAGGGACAACTTTTGATGTCTTTGTCCGCAAT    747
                     |..|.||.||.|.|||||||||.||.||.||||||||.|||||..|.|||
BPUM_2626___m    698 ATGTTGTGAAGAACACGGAAGGCACTACATTTGATGTATTTGTAAGAAAT    747

BSNT_04340___    748 ACGTTCTATGATACGTTTTATATTCCTGCGTACGGCCACCACAATGTATT    797
                     |||||.||||||||.||.|||||||||||.||.||..|.||.|||||..|
BPUM_2626___m    748 ACGTTTTATGATACCTTCTATATTCCTGCCTATGGAAATCATAATGTCCT    797

BSNT_04340___    798 AAACTCATTGGCGGTCATTGCGTTATGCCATTATGAAGAAATTGAT-TCC    846
                     .||.|||||.||.||||||||.|||||.|||||||||...|||||| |..
BPUM_2626___m    798 TAATTCATTAGCTGTCATTGCATTATGTCATTATGAATCCATTGATGTAG    847

BSNT_04340___    847 AGCATCATTAA----GCATGCTCTCAAATCCTTTGGGGGCGTCAAACGCA    892
                     ||| ||||.||    ||  |||..|.|  |.|||||.||.||.||||||.
BPUM_2626___m    848 AGC-TCATCAAAGGGGC--GCTAACGA--CATTTGGTGGTGTGAAACGCC    892

BSNT_04340___    893 GATTCAATG-AGAAGCAGCTTGGGGATCAAGTGCTGATCGATGACTATGC    941
                     |.||||||| |.|||.|| |.||.|..||.||..|.||.||.||||||||
BPUM_2626___m    893 GCTTCAATGAAAAAGTAG-TCGGTGCGCAGGTTTTAATTGACGACTATGC    941

BSNT_04340___    942 CCATCATCCGACAGAAATAAAAGTGACAATCGAGGCGGCAAGACAGAAGT    991
                     ||||||.||.||.||.||..||||.|||||.||.||.|||.|.||.||||
BPUM_2626___m    942 CCATCACCCAACGGAGATTGAAGTCACAATTGAAGCAGCACGCCAAAAGT    991

BSNT_04340___    992 ATCCTGATCGGGAAATTGTCGCGGTATTCCAGCCTCATACATTTACACGG   1041
                     ||||.||.||.||.||||||||.||.||||||||.|||||.||.|||||.
BPUM_2626___m    992 ATCCAGACCGTGAGATTGTCGCTGTTTTCCAGCCGCATACCTTCACACGT   1041

BSNT_04340___   1042 ACGCAGCAGTTCCTTGA-CGAATTTGCAGAAAGCCTG-----AGCGGCGC   1085
                     ||.|||||.|| |||.| .||||||||.||.||.|||     ||||    
BPUM_2626___m   1042 ACACAGCAATT-CTTAAGTGAATTTGCTGACAGTCTGAAAAAAGCG----   1086

BSNT_04340___   1086 TGACTGTGTGTATTTATGCGATATTTTCGGCTCAGCCCGTGAGAA---TG   1132
                      ||||.|||.||..||||||||||||||||.|||||||||||.||   ||
BPUM_2626___m   1087 -GACTATGTATACCTATGCGATATTTTCGGTTCAGCCCGTGAAAACATTG   1135

BSNT_04340___   1133 CCGGAAAGCTGACGATCGGCGATCTCCAGGGA-AAAATTCATAATGCCAA   1181
                       ||||| ||||..||||..|||.|.| |.|| |||||.|...|.|||.|
BPUM_2626___m   1136 --GGAAA-CTGAGCATCGAAGATTTAC-GTGAGAAAATCCCGCAGGCCCA   1181

BSNT_04340___   1182 GCTGATTGAAGAAGATGACACATCTGTTTTAAAAGCTCATGATAAAGCCG   1231
                     ..||||||.||||||.||.||||||||..|.|||||.|   |.||||..|
BPUM_2626___m   1182 ATTGATTGCAGAAGAAGATACATCTGTGCTGAAAGCGC---ACAAAGATG   1228

BSNT_04340___   1232 ---TTCTCATCTTCATGGGAGCAGGAGATATCCAAAAATATATGAGAGCC   1278
                        ||||.|||||.||||||||||||||.||.|||||||||.||.||||.
BPUM_2626___m   1229 GAATTCTGATCTTTATGGGAGCAGGAGACATTCAAAAATATTTGCGAGCT   1278

BSNT_04340___   1279 TACGAAAACGTCATGGCATAA   1299
                     ||.|||||.|||...|.||||
BPUM_2626___m   1279 TATGAAAAAGTCGCTGTATAA   1299


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