Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04338 and BPUM_2625
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:53
# Commandline: needle
# -asequence dna-align/BSNT_04338___ytxG.1.24716.seq
# -bsequence dna-align/BPUM_2625___ytxG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04338___ytxG-BPUM_2625___ytxG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04338___ytxG-BPUM_2625___ytxG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04338___ytxG
# 2: BPUM_2625___ytxG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 302/430 (70.2%)
# Similarity: 302/430 (70.2%)
# Gaps: 17/430 ( 4.0%)
# Score: 1024.0
#
#
#=======================================
BSNT_04338___ 1 ATGATTATTATTCTTTATTTGAGCGTTGCACTCATCGCAGTTGCATTTCT 50
||||||||||||||.|||.|.|||||||||||.||||||.|.||.||.||
BPUM_2625___y 1 ATGATTATTATTCTATATCTAAGCGTTGCACTGATCGCAATAGCTTTCCT 50
BSNT_04338___ 51 CGTATTAGTGATCTACTTGTCTAAAACACTGAAGTCATTGCAGCTGACAC 100
|.|..|.||.|||||||||||.||||||.|.||.||.||.|||||||||.
BPUM_2625___y 51 CATTCTTGTCATCTACTTGTCCAAAACATTAAAATCCTTACAGCTGACAT 100
BSNT_04338___ 101 TAAAAAACGTCGCATCCACTCTTGAAGGGCTGGAGGGACAAATG-AAGGG 149
||||.||.||||||||.|||.|.|||||.||.||.||.||.||| |||||
BPUM_2625___y 101 TAAAGAATGTCGCATCAACTTTAGAAGGTCTTGAAGGTCAGATGCAAGGG 150
BSNT_04338___ 150 CATCACAACTGAAACAGCCGAGCTTTTACATAAGACCAACCGCCTGGCTG 199
|||||.||.||.|||||..||.|..||||||||||.||.|..||.||||
BPUM_2625___y 151 -ATCACCACAGAGACAGCACAGTTGCTACATAAGACGAATCAGCTTGCTG 199
BSNT_04338___ 200 AAGATATTCAGGAAAAATCAGAAAAGCTGAATACGGTCGTTCATGCTGTT 249
|||||||.||.||.|||||||.|||.||....||.||.||..||||.||.
BPUM_2625___y 200 AAGATATCCAAGACAAATCAGCAAAACTAGGCACAGTTGTGGATGCGGTG 249
BSNT_04338___ 250 CAAGGAGTGGGAGCTTCTGTACAGCAGTTCAATACATCCATGAAACAAGC 299
||.|||.|.||.|..||..|..|.||.||.||||||..|||.||.||.||
BPUM_2625___y 250 CAGGGAATTGGCGGCTCGATCAACCAATTTAATACAAGCATAAAGCAGGC 299
BSNT_04338___ 300 GGCAGGGTCTGTATCGGCATCAGTTAGAGAAAATCAAGATAAGATCAATC 349
.||.||..|.||.||..||||.|||..|..|||||||||.||..|||...
BPUM_2625___y 300 AGCTGGTGCGGTTTCTTCATCCGTTGAACGAAATCAAGAAAAAGTCACGG 349
BSNT_04338___ 350 AAGTTGTCACATGGAGTCAAGCAGCAATGGAAATTTGGGAGAAATGGAAG 399
|.||.||.|..||||||.|.||||||.|.|||||||...|.||||||||.
BPUM_2625___y 350 ATGTCGTAAGCTGGAGTAACGCAGCACTTGAAATTTATAAAAAATGGAAA 399
BSNT_04338___ 400 C----AAAAGA--AAAAATCAGCCCTGTAA 423
| ||||.| ||||||.|
BPUM_2625___y 400 CAACGAAAACACCAAAAATAA--------- 420
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