Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04332 and BPUM_2621
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence dna-align/BSNT_04332___aroA.1.24716.seq
# -bsequence dna-align/BPUM_2621___aroA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04332___aroA-BPUM_2621___aroA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04332___aroA-BPUM_2621___aroA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04332___aroA
# 2: BPUM_2621___aroA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1091
# Identity: 856/1091 (78.5%)
# Similarity: 856/1091 (78.5%)
# Gaps: 19/1091 ( 1.7%)
# Score: 3335.0
#
#
#=======================================
BSNT_04332___ 1 ATGAAAAAAATGAGCAACACAGAGTTAGAGCTTTTAAGGCAGAAAGCAGA 50
||||||||||..||..||||.|..||.||.|||.|||||||
BPUM_2621___a 1 ---------ATGAGCAACAATGAACTAGAACAATTGAGACAGCAAGCAGA 41
BSNT_04332___ 51 CGAATTAAACCTACAAATTTTAAAACTAATCAACGAACGCGGAAATGTTG 100
.|||.||||.||.||||||||||||||.|||||.|||.|.|||||..|||
BPUM_2621___a 42 TGAACTAAATCTTCAAATTTTAAAACTGATCAATGAAAGAGGAAACATTG 91
BSNT_04332___ 101 TAAAAGAGATCGGTAAAGCGAAGGAAGCACAGGGCGTCAACCGATTTGAC 150
|||||||.||.|||||||||||||||||.||.||.||||||||.|.|||.
BPUM_2621___a 92 TAAAAGAAATTGGTAAAGCGAAGGAAGCGCAAGGTGTCAACCGTTATGAT 141
BSNT_04332___ 151 CCTGTCAGAGAACGCACAATGTTAAACAATATCATTGAAAACAATGACGG 200
|||||||||||.|||||||||.|||||.|.||..|||||.|.|||||.||
BPUM_2621___a 142 CCTGTCAGAGAGCGCACAATGCTAAACCAAATTCTTGAAGAAAATGATGG 191
BSNT_04332___ 201 GCCGTTCGAAAATTCAACCATCCAGCACATTTTTAAAGAGATATTCAAAG 250
|||.||||||||.|||||.||.|||||.|||||.||||||||.|||||||
BPUM_2621___a 192 GCCATTCGAAAACTCAACGATTCAGCATATTTTCAAAGAGATTTTCAAAG 241
BSNT_04332___ 251 CCGGTTTAGAGCTTCAGGAAGAAGATCACAGCAAAGCGCTGCTTGTCTCC 300
|.|||.||||||||||.|||||.||||||||||||||.||.|||||.||.
BPUM_2621___a 242 CAGGTCTAGAGCTTCAAGAAGATGATCACAGCAAAGCACTTCTTGTTTCT 291
BSNT_04332___ 301 CGCAAGAAAAAACCTGAAGATACAATTGTTGATATCAAAGGCGAAAAAAT 350
||.|||||||||||||||.||||||||||..|||||||.||.|||...||
BPUM_2621___a 292 CGTAAGAAAAAACCTGAAAATACAATTGTCAATATCAATGGAGAAGCGAT 341
BSNT_04332___ 351 CGGAGACGGCCAGCAAAGATTCATTGTCGGCCCATGTGCGGTAGAGAGCT 400
||||||.||..|.||..|.|||||.||.||.||||||||.||.||.||||
BPUM_2621___a 342 CGGAGATGGGAAACAGCGCTTCATCGTTGGACCATGTGCTGTTGAAAGCT 391
BSNT_04332___ 401 ATGAGCAGGTAGCTGAAGTCGCTGCAGCTGCGAAAAAACAAGGGATTAAA 450
|.|||||.||.||.|||||.||.|||||.||||||.|.||| |||.||||
BPUM_2621___a 392 ACGAGCAAGTCGCAGAAGTGGCGGCAGCAGCGAAACAGCAA-GGACTAAA 440
BSNT_04332___ 451 ATT--TTGCGCGGTGGAGCCTTTAAGCCTCGTACGAGCCCATACGATTTC 498
||| || |||||.|||||.|||||.|||||.||.||.||||||||.|||
BPUM_2621___a 441 ATTACTT-CGCGGAGGAGCATTTAAACCTCGCACAAGTCCATACGACTTC 489
BSNT_04332___ 499 CAAGGGCTTGGTGTTGAAGGCCTTCAAATTTTAAAACGTGTAGCGGATGA 548
|||||.||||||||.||.||.||..|||||.|.||.||||||||.|||||
BPUM_2621___a 490 CAAGGACTTGGTGTAGACGGTCTAAAAATTCTCAAGCGTGTAGCAGATGA 539
BSNT_04332___ 549 ATTTGATCTGGCGGTTATCAGTGAAATCGTAACTCCGGCTCATATCGAAG 598
||..|.|||.||.||.||.|||||||||||.|.|||.|||||.||..|||
BPUM_2621___a 540 ATACGGTCTTGCTGTCATTAGTGAAATCGTCAATCCTGCTCACATTCAAG 589
BSNT_04332___ 599 AAGCGCTGGACTACATTGATGTCATTCAAATCGGAGCGCGCAATATGCAA 648
|||||.|.||..|.||.||||||||.||||||||.||.||.||.||||||
BPUM_2621___a 590 AAGCGATTGAGCATATCGATGTCATCCAAATCGGTGCACGAAACATGCAA 639
BSNT_04332___ 649 AACTTCGAATTGCTGAAAGCGGCCGGCGCCGTGAAAAAGCCAGTGCTTCT 698
|||||||||.|..|.||||..||.||..|.|||||.||.||.||.|||.|
BPUM_2621___a 640 AACTTCGAACTTTTAAAAGAAGCTGGATCTGTGAACAAACCTGTTCTTTT 689
BSNT_04332___ 699 GAAGCGCGGTCTTGCTGCAACGATCTCTGAATTCATCAATGCTGCTGAAT 748
.||.||.||||||||.||.|||||.||.||||||||||||||.|||||||
BPUM_2621___a 690 AAAACGTGGTCTTGCAGCGACGATTTCAGAATTCATCAATGCAGCTGAAT 739
BSNT_04332___ 749 ACATCATGTCACAAGGAAATGACCAAATTATCCTTTGTGAGCGCGGAATC 798
|||||||..|.|||||||||||.|||||.||||||||.|||||.||.|||
BPUM_2621___a 740 ACATCATCGCCCAAGGAAATGATCAAATCATCCTTTGCGAGCGTGGTATC 789
BSNT_04332___ 799 AGAACATATGAAACAGCAACGAGAAACACGCTGGATATTTCAGCTGTGCC 848
.|.|||||.|||||||||||.|||||.|||||.||||||||.||||||||
BPUM_2621___a 790 CGCACATACGAAACAGCAACAAGAAATACGCTAGATATTTCTGCTGTGCC 839
BSNT_04332___ 849 GATTTTGAAACAAGAAACGCATTTGCCAGTCTTTGTTGATGTTACGCATT 898
.||||||||||||||.||.|||||.||||||||.||||||||.||.||.|
BPUM_2621___a 840 AATTTTGAAACAAGAGACACATTTACCAGTCTTCGTTGATGTGACACACT 889
BSNT_04332___ 899 CAACAGGCCGCCGTGACCTCTTGCTTCCGACAGCTAAAGCCGCTTTAGCG 948
||||.||.||..|.||.||..|.|||||.|||||.|||||.|||.|.|||
BPUM_2621___a 890 CAACTGGACGTAGAGATCTTCTCCTTCCAACAGCGAAAGCAGCTCTTGCG 939
BSNT_04332___ 949 ATCGGTGCTGATGGCGTAATGGCTGAGGTTCACCCTGATCCGTCAGTCGC 998
||.||.||.||.||.||.|||||.||.||.||.||.|||||.||.||.||
BPUM_2621___a 940 ATTGGAGCAGACGGTGTTATGGCAGAAGTGCATCCAGATCCATCTGTTGC 989
BSNT_04332___ 999 ACTTTCTGACTCTGCTCAGCAAATGGCGATTCCTGAATTCGAAAAATGGC 1048
..|.||||||||.||.||||||||||..||||||.||||||||||||||.
BPUM_2621___a 990 TTTATCTGACTCAGCACAGCAAATGGACATTCCTCAATTCGAAAAATGGT 1039
BSNT_04332___ 1049 TGAATGAAC-TGAAG-CCAATGGTGAA-AGTCAACGCTTAA 1086
|..||| | |.||| |||.|.||.|| |.|| ||||.|||
BPUM_2621___a 1040 TAGATG--CGTTAAGACCACTTGTTAACATTC-ACGCATAA 1077
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