Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04306 and BPUM_2601
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_04306___sspA.1.24716.seq
# -bsequence dna-align/BPUM_2601___sspA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04306___sspA-BPUM_2601___sspA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04306___sspA-BPUM_2601___sspA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04306___sspA
# 2: BPUM_2601___sspA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 173/217 (79.7%)
# Similarity: 173/217 (79.7%)
# Gaps: 11/217 ( 5.1%)
# Score: 689.5
#
#
#=======================================
BSNT_04306___ 1 ATGGCT-AACAATAACTCAGGTAACAGC------AACAACCTTTTAGTAC 43
|||||| |||||.| |||..|| ||| |||.|..|..||||||
BPUM_2601___s 1 ATGGCTCAACAAAA---CAGACAA-AGCAGTTCTAACCAATTACTAGTAC 46
BSNT_04306___ 44 CAGGAGCTGCTCAAGCGATCGACCAAATGAAATTAGAAATCGCTTCTGAA 93
||||.|||||.|||||.||||||||||||||.|..|||||||||||||||
BPUM_2601___s 47 CAGGCGCTGCACAAGCAATCGACCAAATGAAGTACGAAATCGCTTCTGAA 96
BSNT_04306___ 94 TTCGGTGTAAACCTTGGAGCAGACACAACTTCTCGCGCTAACGGTTCTGT 143
|||||||||||||||||.|||||.|||||..|||||||||||||.||.||
BPUM_2601___s 97 TTCGGTGTAAACCTTGGTGCAGAAACAACAGCTCGCGCTAACGGATCAGT 146
BSNT_04306___ 144 TGGAGGAGAGATCACAAAACGTCTTGTATCTTTTGCTCAACAAAACATGG 193
|||.|||||.|||||.||.|||||||||||||..|||||||||.|.||||
BPUM_2601___s 147 TGGTGGAGAAATCACTAAGCGTCTTGTATCTTACGCTCAACAACATATGG 196
BSNT_04306___ 194 GCGGAGGACAATTCTAA 210
|.||.|||...||||||
BPUM_2601___s 197 GTGGCGGATCTTTCTAA 213
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