Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03128 and BPUM_2590

See Amino acid alignment / Visit BSNT_03128 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence dna-align/BSNT_03128___yocG.1.24716.seq
#    -bsequence dna-align/BPUM_2590___desR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03128___yocG-BPUM_2590___desR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03128___yocG-BPUM_2590___desR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03128___yocG
# 2: BPUM_2590___desR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 603
# Identity:     460/603 (76.3%)
# Similarity:   460/603 (76.3%)
# Gaps:           6/603 ( 1.0%)
# Score: 1711.0
# 
#
#=======================================

BSNT_03128___      1 ATGATTAGTATATTTATTGCAGAAGATCAGCAAATGCTGCTGGGCGCTTT     50
                     |||||.|..||.|||||.|||||||||||||||||||||||.||.||..|
BPUM_2590___d      1 ATGATCAACATCTTTATCGCAGAAGATCAGCAAATGCTGCTCGGTGCACT     50

BSNT_03128___     51 AGGATCACTTCTAAACCTCGAAGACGATATGGAAGTCGTAGGCAAAGGTA    100
                     .||.||||||||..|..|.||||||||||||...||.||.||.|||||||
BPUM_2590___d     51 CGGTTCACTTCTTGATTTAGAAGACGATATGACGGTTGTTGGAAAAGGTA    100

BSNT_03128___    101 CAACCGGCCAAGATGCTGTTGATTTTGTCAAAAAACGCCAGCCTGATGTA    150
                     |.|.|||.||.||.||..|||||||||.|.||||||.||....||||.|.
BPUM_2590___d    101 CGAACGGTCAGGACGCCATTGATTTTGCCGAAAAACACCCTGTTGATATT    150

BSNT_03128___    151 TGTATTATGGACATTGAAATGCCCGGAAAAACAGGGCTTGAAGCTGCTGA    200
                     ||..|.|||||.|||||||||||.||||||||.||.|||||.||.||.||
BPUM_2590___d    151 TGCTTAATGGATATTGAAATGCCAGGAAAAACGGGACTTGATGCAGCGGA    200

BSNT_03128___    201 GGAGCTAAAAGATACAGGCTG-CAAAATTATCATCTTAACCACCTTCGCC    249
                     .|||||.||||..|| .|.|| .|||||.|||||.|||||.|||||.|||
BPUM_2590___d    201 AGAGCTCAAAGGAAC-TGATGTAAAAATCATCATTTTAACGACCTTTGCC    249

BSNT_03128___    250 AGACCCGGTTACTTTCAGAGAGCTATTAAAGCTGGTGTTAAAGGCTATTT    299
                     .|..|.||.||.||.||.||.||..||||||||||.||.|..||||||.|
BPUM_2590___d    250 CGCTCTGGCTATTTCCAAAGGGCGCTTAAAGCTGGCGTCAGCGGCTATAT    299

BSNT_03128___    300 GTTAAAAGACAGTCCGAGTGAAGAGCTGGCCAACGCCATCCGTAGCGTCA    349
                     |.|.|||||.|||||.||||||||.|||||.|..|||||.||.||.||.|
BPUM_2590___d    300 GCTGAAAGATAGTCCAAGTGAAGATCTGGCAAGTGCCATTCGCAGTGTGA    349

BSNT_03128___    350 TGAACGGAAAACGAA--TCTATGCACCTGAGCTGATGGAGGACTTATACA    397
                     ||||.||.|||  ||  |.||.||.|||||..|.|||||.||||||||.|
BPUM_2590___d    350 TGAAAGGGAAA--AAGGTGTACGCCCCTGAATTAATGGAAGACTTATATA    397

BSNT_03128___    398 GCGAAGCTAACCCTCTTACAGATAGAGAAAAAGAAGTGCTTGAACTTGTG    447
                     |.||.|..||.|||.|.|||||..||||.|||..|||.|||||.||.||.
BPUM_2590___d    398 GTGACGAAAATCCTTTAACAGAACGAGAGAAATCAGTCCTTGAGCTCGTC    447

BSNT_03128___    448 GCTGACGGTAAAAACACAAAAGAAATCGCTCAGGAACTCAGCATCAAAAG    497
                     ||.|||||.|||||||||||||||||.||..|.|||||||||||.|||||
BPUM_2590___d    448 GCAGACGGCAAAAACACAAAAGAAATTGCGAAAGAACTCAGCATTAAAAG    497

BSNT_03128___    498 CGGGACGGTGCGGAATTATATCTCAATGATTCTAGAAAAGCTTGAAGTGA    547
                     |||.||.||.||.||.||.||.||.||.|||.||||.|||||.|||||||
BPUM_2590___d    498 CGGCACTGTTCGAAACTACATTTCGATTATTTTAGATAAGCTAGAAGTGA    547

BSNT_03128___    548 AAAATCGAATTGAAGCCATTACCCGGTCAAAGGAAAAAGGCTGGTTTAAA    597
                     ||||.||.||||||||||||||.||.|||||.||||||||||||||||||
BPUM_2590___d    548 AAAACCGCATTGAAGCCATTACACGTTCAAAAGAAAAAGGCTGGTTTAAA    597

BSNT_03128___    598 TAA    600
                     |||
BPUM_2590___d    598 TAA    600


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