Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04295 and BPUM_2581
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_04295___tpx.1.24716.seq
# -bsequence dna-align/BPUM_2581___tpx.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04295___tpx-BPUM_2581___tpx.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04295___tpx-BPUM_2581___tpx.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04295___tpx
# 2: BPUM_2581___tpx
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 518
# Identity: 381/518 (73.6%)
# Similarity: 381/518 (73.6%)
# Gaps: 31/518 ( 6.0%)
# Score: 1380.0
#
#
#=======================================
BSNT_04295___ 1 ATGGCTGAAATTACATTCAAAGGCGGTCCGGTTACACTTGTCGGACAAGA 50
.||||....||.|||||.|||||..||.|.||.||.|||||.|||.|.||
BPUM_2581___t 1 TTGGCATCGATCACATTTAAAGGGAGTTCTGTCACGCTTGTAGGAAATGA 50
BSNT_04295___ 51 AGTGAAGGTAGGAGATCAAGCTCCTGATTTCACAGTGCTGACTAACAGCC 100
|||.||.|||||.||.||.|||||.||||||||.||..|.||.|||...|
BPUM_2581___t 51 AGTAAAAGTAGGCGAGCAGGCTCCAGATTTCACGGTATTAACGAACTCAC 100
BSNT_04295___ 101 TTGAAGAAAAATCGTTAGCTGACATGAAAGGAAAGGTAACGATTATTTCT 150
|.|..|||...||..|..||||..|.|.||||||.||.|||||.||.||.
BPUM_2581___t 101 TAGGGGAAGTTTCACTTTCTGATTTAACAGGAAAAGTGACGATCATCTCA 150
BSNT_04295___ 151 GTTATCCCTTCAATTGATACAGGTGTTTGTGATGCACAAACACGCCGTTT 200
||.||.|||||.||||||||||||||.|||||.|||||||||.|.|||||
BPUM_2581___t 151 GTGATTCCTTCTATTGATACAGGTGTGTGTGACGCACAAACAAGACGTTT 200
BSNT_04295___ 201 TAACGAAGAAGCTGCAAAGC----TTGGAGAT---GTCAACGTCTACACA 243
.||.|||||.|| ||| || ||.| |||||..||||.|||
BPUM_2581___t 201 CAATGAAGAGGC-----AGCCGGTTT--AGGTCCGGTCAATATCTATACA 243
BSNT_04295___ 244 ATCAGTGCAGACCTTCCATTCGCGCAAGCGCGCTGGTGCGGCGCTAACGG 293
||.|||||||||||||||||.||.|||||.||||||||.||.||.|||||
BPUM_2581___t 244 ATTAGTGCAGACCTTCCATTTGCACAAGCACGCTGGTGTGGAGCAAACGG 293
BSNT_04295___ 294 AATTGACAAAGTGGAAACACTGTCTGACCACAGAGATATGTCATTTGGCG 343
||||||.||.||.||||||.|.|||||.||||||||||||||||||||.|
BPUM_2581___t 294 AATTGAAAATGTCGAAACATTATCTGATCACAGAGATATGTCATTTGGTG 343
BSNT_04295___ 344 AAGCGTTCGGTGTGTATATTAAAGAACTTCGTCTGCTTGCGCG------T 387
||||.||||||||.|||||..|||||.|.|||.|..|.||||| |
BPUM_2581___t 344 AAGCATTCGGTGTTTATATGGAAGAATTGCGTTTATTGGCGCGTGGAGTT 393
BSNT_04295___ 388 TCCGTATTTGTCCTTGATGAGAATGGAAAAGTCGTTTACGCTGAATATGT 437
|.||||||.|.||.| |||||.|||||.||||||.|||||||.||
BPUM_2581___t 394 TTCGTATTAGACCCT------AATGGGAAAGTGGTTTACACTGAATACGT 437
BSNT_04295___ 438 AAGCGAAGCAACAAACCACCCGAACTATG-AAAAGCCAATTGAGGCTGCT 486
||||||||||||.||.|||||.||.|||| ||||||| |||||.|||||.
BPUM_2581___t 438 AAGCGAAGCAACGAATCACCCAAATTATGAAAAAGCC-ATTGAAGCTGCA 486
BSNT_04295___ 487 AAGGCATTAGTGAAGTAA 504
|| ||.|.||...|||
BPUM_2581___t 487 AA---ATCACTGTTATAA 501
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