Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04282 and BPUM_2574

See Amino acid alignment / Visit BSNT_04282 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence dna-align/BSNT_04282___ytkK.1.24716.seq
#    -bsequence dna-align/BPUM_2574___fabG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04282___ytkK-BPUM_2574___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04282___ytkK-BPUM_2574___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04282___ytkK
# 2: BPUM_2574___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 802
# Identity:     542/802 (67.6%)
# Similarity:   542/802 (67.6%)
# Gaps:          80/802 (10.0%)
# Score: 1764.5
# 
#
#=======================================

BSNT_04282___      1 GTGCGACATGCTTTAATTACTGCCGGTTCGAAGGGTTTAGGCCGCAAAGT     50
                     ||||||||.||.|||||.||.||.|||||.||.||..|.|||.|.|||||
BPUM_2574___f      1 GTGCGACACGCATTAATAACAGCGGGTTCTAAAGGACTTGGCAGGAAAGT     50

BSNT_04282___     51 GACTGAAACGTTGCTTGCA-AAGGGGTATTCAGTAACAGTCAATTACAGA     99
                     .||.||..|.||.| ||.| |.|||||||||.||.|||||||||||..||
BPUM_2574___f     51 CACCGAGTCTTTAC-TGAATATGGGGTATTCTGTGACAGTCAATTATCGA     99

BSNT_04282___    100 CAG-GATGAGGAGGCAGTCAGCCGC--CTGAAGGAAGCCTGTCCCGATTG    146
                      || |||||.||.||.||  ||.||  .||||.||||..|..|..||.|.
BPUM_2574___f    100 -AGTGATGATGAAGCTGT--GCGGCAGATGAAAGAAGAATTGCAGGAATA    146

BSNT_04282___    147 TCTTGACCGGCTGCAATTTGTAAAAGGTGATGTCACCAAAAAAGAAGATC    196
                     |...||...|||.||||||||..|||||||.||.||.||.|||||||||.
BPUM_2574___f    147 TGAAGAAAAGCTTCAATTTGTCCAAGGTGACGTGACAAACAAAGAAGATT    196

BSNT_04282___    197 TGCTGCGTATTGCAAAG-----------GCTGCCTTAAAC----CGCTTC    231
                     |            ||||           ||||.|   |||    ||.||.
BPUM_2574___f    197 T------------AAAGAACATGGTCGCGCTGGC---AACCGAGCGATTT    231

BSNT_04282___    232 GGAAGGATCGACTTTTTGATTAACAACGCGGGACCATACATATTTGAACG    281
                     |||.|||||||...||||||||||||.||.|||||.||.||.||||||||
BPUM_2574___f    232 GGACGGATCGATGCTTTGATTAACAATGCCGGACCTTATATTTTTGAACG    281

BSNT_04282___    282 TAAAAAGTTAGCCGATTATACTGATGATGAATGGTATGGCATGCTGGAAG    331
                     .|||||..||||.||||||.|.||.||.|||||||||...|||.||||||
BPUM_2574___f    282 AAAAAAACTAGCGGATTATTCCGAGGAAGAATGGTATCAAATGATGGAAG    331

BSNT_04282___    332 GAAATTTAAGCGCCGTCTTTCATTTATTCAAAGCGGTTATTCCTGTTATG    381
                     |.||..||...||.||.||.|||||.||||.|..|||.||.||..|.|||
BPUM_2574___f    332 GCAACCTATCTGCTGTGTTCCATTTGTTCAGAATGGTCATCCCAATGATG    381

BSNT_04282___    382 AGAAAACAGCAA---TTTGGACGCATCATTACGTACGGATTCCAAGGTGC    428
                     ||||   |||||   ||.||.||.||..|.||.||.||.|||||||||||
BPUM_2574___f    382 AGAA---AGCAAGGCTTCGGCCGAATTGTCACATATGGCTTCCAAGGTGC    428

BSNT_04282___    429 GGCTCACGCGCCCGGCTGGCTTCACCGATCGGCATTTGGCGCTGCGAAAG    478
                     .|..||.|||||.||.|||.|.|||.||||.||.||.||.||.||.||||
BPUM_2574___f    429 AGACCATGCGCCGGGATGGATGCACAGATCAGCCTTCGGAGCAGCAAAAG    478

BSNT_04282___    479 TGGGCTTGGCTTCTTTGACGAAGACAATTGCCATTGAAGAAGCCGAATTC    528
                     ||||..|.||.||..|||||||.||.|||||.|||||||||||.|||..|
BPUM_2574___f    479 TGGGGCTCGCGTCACTGACGAAAACCATTGCGATTGAAGAAGCAGAAAAC    528

BSNT_04282___    529 GGCATAACCTCCAACATGGTTTGCCCGGGAGACATTGTCGGCGACATGAA    578
                     |||||.||..||||.||||||||.||.||..|.||.||.||.||||||||
BPUM_2574___f    529 GGCATCACGGCCAATATGGTTTGTCCAGGCAAAATCGTTGGTGACATGAA    578

BSNT_04282___    579 AGAAGCATCGATAGAGGAA----GCCAGAATGCGAATCGGCAAA---GAA    621
                     ||||.|..|.|||||.|||    ||||| |||         |||   ||.
BPUM_2574___f    579 AGAATCGACAATAGAAGAAGCACGCCAG-ATG---------AAAGATGAT    618

BSNT_04282___    622 AAAACGCCGATAGGAAGATCCGGTACAGGCGAGGATATCGCCCGGATTAT    671
                     .||||||||||.||.||.||.|||||.||.||.|||||||..||.||.| 
BPUM_2574___f    619 GAAACGCCGATTGGCAGGTCTGGTACTGGAGAAGATATCGGTCGCATCA-    667

BSNT_04282___    672 CGCTTTCC----TGTGTGAGGAGAACTCAGACCTTGTGACAGGGACTGTC    717
                        |||||    |.||.||.||...|||.|||||..|.|||||.|||||.
BPUM_2574___f    668 ---TTTCCTTTTTATGCGATGACCGCTCTGACCTGATTACAGGAACTGTT    714

BSNT_04282___    718 ATTGAAGCCACTGGAGGCCTCAATGTCATTAACAAGA-ATCAAACAACAT    766
                     ||||||||.||.||.||.||.||.||||||.|| ||| ||.||       
BPUM_2574___f    715 ATTGAAGCAACAGGTGGTCTTAACGTCATTCAC-AGACATTAA-------    756

BSNT_04282___    767 AA    768
                       
BPUM_2574___f    756 --    756


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04282 and BPUM_2574

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
