Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04281 and BPUM_2573
See
Amino acid alignment /
Visit
BSNT_04281 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_04281___ytkL.1.24716.seq
# -bsequence dna-align/BPUM_2573___ytkL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04281___ytkL-BPUM_2573___ytkL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04281___ytkL-BPUM_2573___ytkL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04281___ytkL
# 2: BPUM_2573___ytkL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 712
# Identity: 502/712 (70.5%)
# Similarity: 502/712 (70.5%)
# Gaps: 56/712 ( 7.9%)
# Score: 1714.0
#
#
#=======================================
BSNT_04281___ 1 ATGAAAGTGACATATCACGGACATTCTGTAAT-CACAGTGGAAACGAAGG 49
|||||||..|||||||||||||||||.||..| |||| |.|||||.||.|
BPUM_2573___y 1 ATGAAAGCTACATATCACGGACATTCAGTCGTACACA-TTGAAACAAACG 49
BSNT_04281___ 50 ---ACCATCATATTATTT---TTGATCCGTTTTTAACAGGGAATTCATTA 93
|||| ||||| |||||||.||||||| |.||||.|.|..|
BPUM_2573___y 50 GATACCA------TATTTGGATTGATCCATTTTTAA-ATGGAAATAAGCA 92
BSNT_04281___ 94 -ACGGATATAAAGCCGGAGGATGTAAAAGCGGATGTCATCTTACTAACGC 142
||.|||||.||.|||.|.|||||.||||||||||||||.||.||.||||
BPUM_2573___y 93 CACAGATATCAAACCGCAAGATGTTAAAGCGGATGTCATTTTGCTCACGC 142
BSNT_04281___ 143 ACGGCCACAATGACCATGTCGGTGATAC---TGAACAAATCGCCAAGCAA 189
|.||.||....||.||..|||||||.|| || ||||||||||..|.
BPUM_2573___y 143 ATGGGCATGGAGATCACATCGGTGACACCATTG---AAATCGCCAAAAAT 189
BSNT_04281___ 190 AATAACGCGTTGGTTATAGCCCCGAACGAGCTCGCTGTGTACTTAGGCTG 239
|||.||||..|.|||||.||.||...||||||.||....||.|||||.||
BPUM_2573___y 190 AATGACGCACTCGTTATTGCGCCATTCGAGCTTGCCACTTATTTAGGGTG 239
BSNT_04281___ 240 GAAAGGCTTGAATGTTCATCCAATGCA---------TATTGGCGGCTCCC 280
|.||||..|||| ||.||| .|||||.|||...|
BPUM_2573___y 240 GCAAGGGGTGAA---------AACGCACCCGCTTTCGATTGGTGGCGGAC 280
BSNT_04281___ 281 GCCAGTTCGATTTTGGAAAAGTGAAGCTTACACAGGCCTTTCATGGATCA 330
|..|.||.||.|||||.|||||||||||.||.||.||.||.|||||.||.
BPUM_2573___y 281 GGGAATTTGAATTTGGTAAAGTGAAGCTCACTCAAGCGTTCCATGGTTCT 330
BSNT_04281___ 331 GCCATCACAGATGAAGAAAACAAAACGATCACTTACACAGGCATGCCTGC 380
||.||||..||||||||...|||||||||.||.||.|||||||||||..|
BPUM_2573___y 331 GCTATCATTGATGAAGATGCCAAAACGATTACGTATACAGGCATGCCATC 380
BSNT_04281___ 381 CGGTATTTTGCTGACTGTAGAAGATAAAACGATTTTCCACGCGGGCGATA 430
.||||||||..|.||||.|||.|..||||||||||..||.||.||.||.|
BPUM_2573___y 381 AGGTATTTTATTTACTGCAGAGGGCAAAACGATTTATCATGCCGGAGACA 430
BSNT_04281___ 431 CGGCTCTTTTCTCTGATATGAAACTCATTGGCGAATTGAATCATATCGAC 480
|.||.||.||.||.||||||||.||.||.||.||..||||||||||.||.
BPUM_2573___y 431 CTGCACTCTTTTCAGATATGAAGCTGATCGGGGAGCTGAATCATATTGAG 480
BSNT_04281___ 481 CTTGCTTTCCTGCCGATTGGCGATAACTTTACGATGGGGCCTGAAGACGC 530
|||||.|||||.|||||.||.||||||||.||||||||.||.||.||.|
BPUM_2573___y 481 CTTGCATTCCTTCCGATCGGTGATAACTTCACGATGGGACCGGACGATG- 529
BSNT_04281___ 531 CAAG-CTTGCCGCTGAATGGCTGCGCGCAAAACAGGTCGTGCCGGTGCAT 579
|||| .|.||.||.||||||||.||.||.||.||.||||||||.||.||.
BPUM_2573___y 530 CAAGAATCGCAGCCGAATGGCTTCGGGCGAAGCAAGTCGTGCCAGTTCAC 579
BSNT_04281___ 580 TACAATACATTCCCGGTCATCGAACAAGACCCAGAAGCATTCGCTGACAG 629
||||..|||||||||...||.||.||.||||||.|.|||||.||.|||||
BPUM_2573___y 580 TACAGCACATTCCCGCCGATTGAGCAGGACCCACATGCATTTGCAGACAG 629
BSNT_04281___ 630 CCTGCCGGGCGGAGTCGGCAAAGTCATGTCGGT-------CGGTGAGACG 672
|||||..|||||.|||| |.||||| || |||..|..||
BPUM_2573___y 630 CCTGCATGGCGGCGTCG-----GACATGT--GTTAAACAGCGGACAATCG 672
BSNT_04281___ 673 ATCGAGCTTTAA 684
||||||.|||||
BPUM_2573___y 673 ATCGAGATTTAA 684
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.