Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04272 and BPUM_2569
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_04272.1.24716.seq
# -bsequence dna-align/BPUM_2569.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04272-BPUM_2569.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04272-BPUM_2569.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04272
# 2: BPUM_2569
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 136/203 (67.0%)
# Similarity: 136/203 (67.0%)
# Gaps: 28/203 (13.8%)
# Score: 434.0
#
#
#=======================================
BSNT_04272 1 ATGGAGGTTTACAGTGACCGTCAGTTAGCAAAAGATCAAGCAGCCCGTCT 50
|||||||||||.||..|.|||||..|.|||..|||..||||||.|||..|
BPUM_2569 1 ATGGAGGTTTATAGCTATCGTCAAATGGCACGAGACAAAGCAGGCCGGAT 50
BSNT_04272 51 CAGACAAGGTTTTTCTGCATATGCCGAAACAAA--------CTCACTCGC 92
||.|.|.|||.|.|.|||.|||||.||.|||.| ||||.|
BPUM_2569 51 CAAAGACGGTATGTGTGCTTATGCTGAGACAGAAATGATGGCTCATT--- 97
BSNT_04272 93 TTCCCTCATCAAAAAAGAACTTCAATCA-CACAATCTCCAAGTCTACGAG 141
|.||.||||||||| ||.||.|| ||.||||||||||.|||.||.
BPUM_2569 98 -----TAATTAAAAAAGAA-TTAAAGCATCAAAATCTCCAAGCCTATGAA 141
BSNT_04272 142 GACCTT--ACTGATTTCGGCTGCTGGTTCATCCCCGTCACAGATGAACAC 189
|| || |||||..|||||||||||||.|||||.|| |||.| |.
BPUM_2569 142 GA--TTCAACTGACATCGGCTGCTGGTTTATCCCTGT-----ATGCA-AG 183
BSNT_04272 190 TAA 192
|||
BPUM_2569 184 TAA 186
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