Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04266 and BPUM_2563
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_04266___accA.1.24716.seq
# -bsequence dna-align/BPUM_2563___accA2.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04266___accA-BPUM_2563___accA2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04266___accA-BPUM_2563___accA2.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04266___accA
# 2: BPUM_2563___accA2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 991
# Identity: 745/991 (75.2%)
# Similarity: 745/991 (75.2%)
# Gaps: 26/991 ( 2.6%)
# Score: 2737.0
#
#
#=======================================
BSNT_04266___ 1 GTGGCTCCAAGATTAGAATTTGAAAAACCGGTGATTGAACTGCAAACCAA 50
||||||..|..|.||||||||||||||||.||.||||||||.|.|.|.||
BPUM_2563___a 1 GTGGCTGGAGAACTAGAATTTGAAAAACCTGTCATTGAACTTCGAGCGAA 50
BSNT_04266___ 51 AATCGCCGAACTAAAAAAATTCACCCAAGATTCCGATATGGATCTAAGTG 100
|||.|..|||||||||||.|||||.|||.|.||.||.||||||.||||||
BPUM_2563___a 51 AATTGATGAACTAAAAAAGTTCACACAAAACTCAGAAATGGATTTAAGTG 100
BSNT_04266___ 101 CGGAAATCGAACGGCTCGAAGAC-CGTCT-CGCTAAGCTTCAGGATGATA 148
|.|||||.||.||.||.||| || ||||| .|| ||.|||.|.|..||.|
BPUM_2563___a 101 CAGAAATTGAGCGTCTTGAA-ACACGTCTGAGC-AAACTTGAAGCAGACA 148
BSNT_04266___ 149 TTTACAAAAATCTGAAGCCATGGGACCGGGTTCAAATCGCGCGTCTGGCG 198
||||.|.||||.|.|||||.||||||.|.||.||.||.||.||||..|||
BPUM_2563___a 149 TTTATACAAATTTAAAGCCGTGGGACAGAGTACAGATTGCTCGTCATGCG 198
BSNT_04266___ 199 GACCGTCCGACAACTCTTGATTATATCGAACACCTGTTTACCGACTTTTT 248
...||.||.||||||||.|||||.||..||.|.||||||..|.|||||||
BPUM_2563___a 199 ATGCGCCCAACAACTCTCGATTACATTCAAGAGCTGTTTGACAACTTTTT 248
BSNT_04266___ 249 TGAATGTCACGGAGACAGAGCG----TACGGGGACGATGAAGCCATTGTC 294
.||.||||||||.||| || ||.|||||.||||||||.||.||.
BPUM_2563___a 249 CGAGTGTCACGGTGAC----CGTTTTTATGGGGATGATGAAGCGATCGTT 294
BSNT_04266___ 295 GGCGGGATTGCGAAGTTCCACGGCCTCCCTGTAACGGTAATCGGGCATCA 344
||.||.|||||.|.|||..|.||.||.|||||.||.||.||.||.|||||
BPUM_2563___a 295 GGAGGAATTGCCACGTTTAAAGGGCTTCCTGTTACAGTGATTGGCCATCA 344
BSNT_04266___ 345 GCGCGGCAAAGACACGAAGGAAAACCTAGTCCGCAATTTTGGGATGCCGC 394
||||||.|||||.||.||.||||||.|...|||.|||||.||.|||||.|
BPUM_2563___a 345 GCGCGGTAAAGATACAAAAGAAAACTTGCGCCGTAATTTCGGAATGCCTC 394
BSNT_04266___ 395 ATCCAGAAGGCTACAGAAAAGCGCTTCGTCTGATGAAACAGGCTGACAAA 444
||||||||||||||.|.||||||||.||..||||||||||.||.||.|||
BPUM_2563___a 395 ATCCAGAAGGCTACCGTAAAGCGCTGCGCTTGATGAAACAAGCAGATAAA 444
BSNT_04266___ 445 TTTAACAGACCAATTATCTGTTTTATTGATACGAAGGGGGCATACCCCGG 494
|||||..|.||.||.||.||.|||||||||||.||.||.||.||.||.||
BPUM_2563___a 445 TTTAATCGTCCGATCATTTGCTTTATTGATACAAAAGGAGCTTATCCTGG 494
BSNT_04266___ 495 ACGAGCAGCTGAAGAAAGAGGACAAAGTGAAGCTATTGCCAAAAACCTGT 544
...|||||||||||||.|.||.|||||||||||.|||||.||||||||.|
BPUM_2563___a 495 TAAAGCAGCTGAAGAACGTGGGCAAAGTGAAGCAATTGCGAAAAACCTAT 544
BSNT_04266___ 545 TTGAGATGGCCGGCCTTCGAGTGCCTGTTATCTGCATCGTCATCGGTGAA 594
|.||.|||||.||.|||||.||.||.|||.||||.||.|||||.||||||
BPUM_2563___a 545 TCGAAATGGCAGGACTTCGTGTACCGGTTGTCTGTATTGTCATTGGTGAA 594
BSNT_04266___ 595 GGCGGAAGCGGCGGAGCCCTTGGTCTGGGTGTAGGTAATCACTTGCATAT 644
||||||||.|||||.||.||.||..|.||.|||||.||.|||.|..|.||
BPUM_2563___a 595 GGCGGAAGTGGCGGCGCACTAGGCTTAGGCGTAGGAAACCACCTATACAT 644
BSNT_04266___ 645 GCTGGAAAACTCTACTTATTCTGTTATTTCTCCGGAAGGTGCCGCGGCAC 694
|||.||.||.||.||.|||||.||.|||||.||.||||||||.||.||||
BPUM_2563___a 645 GCTAGAGAATTCAACGTATTCAGTGATTTCACCTGAAGGTGCAGCAGCAC 694
BSNT_04266___ 695 TTTTATGGAAGGACTC--CAGTCTTGCTAAAAAAGCAGCAGAAACAATGA 742
|..|.||||||||||| || |||||.||||||||.||||||.||||||
BPUM_2563___a 695 TGCTCTGGAAGGACTCATCA--CTTGCGAAAAAAGCTGCAGAATCAATGA 742
BSNT_04266___ 743 AAATCACTGCGCCGGATTTAAAAGAATTAGGTATTATAGATCATATGATT 792
|.||.||.||.||.||..||||||||||||.||||||||||.||.|.|||
BPUM_2563___a 743 AGATTACGGCTCCAGACCTAAAAGAATTAGATATTATAGATGATGTTATT 792
BSNT_04266___ 793 AAAGAAGTAAAAGGCGGAGCGCACCATGATGTGAAGCTGCAGGCAAGCTA 842
||||||||..||||.|||||.||.|..||.|||||.|..||.|||..|||
BPUM_2563___a 793 AAAGAAGTGCAAGGTGGAGCACATCGAGACGTGAAACAACAAGCAGCCTA 842
BSNT_04266___ 843 TATGGACGAAACCCTTAAACAATCGTTAAAAACTTTGCTGAAGCTGAGCG 892
.||.||..||||..|.|||||.||..|.|.|.|||||||.||.||
BPUM_2563___a 843 CATTGAAAAAACATTAAAACAGTCACTTACATCTTTGCTCAAACT----- 887
BSNT_04266___ 893 AA-----GAAGAATTAGTTCAGCAGCGCTATGAAAAATATAAAGCAATTG 937
|| ||||||.||||..|.||..|.|||.|||||||.||||||||.|
BPUM_2563___a 888 AACACCTGAAGAACTAGTCGAACAAAGATATCAAAAATACAAAGCAATCG 937
BSNT_04266___ 938 GCAAAGTCTCGGTTGAAGATCAATATATCGGGGTAAACTAA 978
|.|||||.|||||||||.||||||||||.||||||||||||
BPUM_2563___a 938 GGAAAGTATCGGTTGAAAATCAATATATTGGGGTAAACTAA 978
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