Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04256 and BPUM_2558
See
Amino acid alignment /
Visit
BSNT_04256 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_04256___ytwI.1.24716.seq
# -bsequence dna-align/BPUM_2558___ytwI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04256___ytwI-BPUM_2558___ytwI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04256___ytwI-BPUM_2558___ytwI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04256___ytwI
# 2: BPUM_2558___ytwI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity: 348/479 (72.7%)
# Similarity: 348/479 (72.7%)
# Gaps: 28/479 ( 5.8%)
# Score: 1201.5
#
#
#=======================================
BSNT_04256___ 1 GTGTTTACACAAGCGAATTTATTTT---TAATTTTACTCTTGGCTATCGC 47
.|||||||.|||||.|||||||||| |..|||||||| |.|||.||
BPUM_2558___y 1 ATGTTTACTCAAGCAAATTTATTTTTGGTTCTTTTACTC---GTTATTGC 47
BSNT_04256___ 48 ACTTATCGCAAAAAACCAATCATTGCTCTTTGCTGTATCCGTCCTT-TTG 96
||||||.|||||||||.|.|||||..||||.||.||.||.||.||| |||
BPUM_2558___y 48 ACTTATTGCAAAAAACAATTCATTAATCTTAGCGGTTTCTGTGCTTATTG 97
BSNT_04256___ 97 ATCATCAAAATCCTAGGGCTTGATCAGAA-ATTATTTCCGACCA----TC 141
..||.||..|..|.||..|.|||||.|| || |||| ||| |.
BPUM_2558___y 98 -GGATTAAGCTGATTGGTTTGGATCAAAAGAT--TTTC---CCAGTTCTT 141
BSNT_04256___ 142 CAGTCAAAAGGCATTAACTGGGGTGTGACCATTATTACCATCGCCGTTCT 191
||.||.||||||||.||.|||||.||.|||.|||||||.||.||.||.||
BPUM_2558___y 142 CAATCGAAAGGCATCAATTGGGGAGTCACCGTTATTACTATTGCTGTACT 191
BSNT_04256___ 192 TGTCCCGATTGCCACGGGAGAAATCGGATTTAAGCAGCTTGGAGAAGCAA 241
||||||.|||||.||.|||||.||.||||||||.|||||||||||||||.
BPUM_2558___y 192 TGTCCCTATTGCAACAGGAGACATTGGATTTAAACAGCTTGGAGAAGCAG 241
BSNT_04256___ 242 TGCGGTCTTCCTACGCATGGATCGCCCTTGGAGCGGGGATCGCAGTGGCG 291
||...|||||.||.||.|||||.||.|||||||||||.||...|||.||.
BPUM_2558___y 242 TGAAATCTTCTTATGCTTGGATTGCACTTGGAGCGGGTATATTAGTAGCA 291
BSNT_04256___ 292 CTGATTGCAAAAAACGGCCTGGCCCTGCTTGAAAATGATCCGCATATTAC 341
.|.||||||||||||||..|.|..||.||.||.||||||||||||||.||
BPUM_2558___y 292 TTAATTGCAAAAAACGGTATTGTGCTACTCGAGAATGATCCGCATATCAC 341
BSNT_04256___ 342 AACTGCTCTCGTGATCGGGACCATTCTTGCGGTTGC-GCTT-TTTGGAGG 389
.||.||.||.|||.|||||||.|||.|.||.|| | |||| ||...|||
BPUM_2558___y 342 GACAGCGCTTGTGTTCGGGACGATTTTGGCAGT--CAGCTTATTCAAAGG 389
BSNT_04256___ 390 AGTTGCGGTGGGACCGCTGATCGGAGCGGGGATTGCTTATTTAGCCATGC 439
.||.||.||.||.||||||||.|||||.||.|||||||||||.||.||||
BPUM_2558___y 390 TGTAGCTGTCGGTCCGCTGATTGGAGCAGGAATTGCTTATTTGGCGATGC 439
BSNT_04256___ 440 AGATCGTAAAACTGTTCA---CTTCATAA 465
||...||.|||.|.|||| .||.|
BPUM_2558___y 440 AGGCTGTGAAATTTTTCAGCGGTTGA--- 465
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.