Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04253 and BPUM_2555
See
Amino acid alignment /
Visit
BSNT_04253 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_04253___icd.1.24716.seq
# -bsequence dna-align/BPUM_2555___icd.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04253___icd-BPUM_2555___icd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04253___icd-BPUM_2555___icd.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04253___icd
# 2: BPUM_2555___icd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1277
# Identity: 1024/1277 (80.2%)
# Similarity: 1024/1277 (80.2%)
# Gaps: 10/1277 ( 0.8%)
# Score: 4116.5
#
#
#=======================================
BSNT_04253___ 1 GTGGCACAAGGTGAAAAAATTACAGTCTCTAACGGAGTATTAAACGTACC 50
.||.|||||||.||||||||||||||..||..|||.|||||.||.|||||
BPUM_2555___i 1 TTGTCACAAGGCGAAAAAATTACAGTTACTGGCGGCGTATTGAATGTACC 50
BSNT_04253___ 51 AAACAACCCGATTATCCCATTTATCGAAGGAGACGGAACTGGTCCTGATA 100
|||.||.||.||||||||.|||||||||||.|||||||..||||||||.|
BPUM_2555___i 51 AAATAATCCAATTATCCCGTTTATCGAAGGGGACGGAATCGGTCCTGACA 100
BSNT_04253___ 101 TTTGGAACGCGGCTTCGAAG-GTTTTAGAAGCAGCAGTAGAAAAAGCATA 149
|||||||.||.||.|| ||| ||..|.||||||||.||||||||||||||
BPUM_2555___i 101 TTTGGAAAGCAGCATC-AAGAGTACTTGAAGCAGCTGTAGAAAAAGCATA 149
BSNT_04253___ 150 CAAAGGCGAAAAGAAAATTACATGGAAAGAAGTTTACGCCGGAGAAAAGG 199
.|||||.||||||.||||.||.|||||||||||.||.|||||.||.||.|
BPUM_2555___i 150 TAAAGGTGAAAAGCAAATCACTTGGAAAGAAGTATATGCCGGTGAGAAAG 199
BSNT_04253___ 200 CTTATAATAAAACAGGTGAGTGGCTCCCTGCTGAAACATTAGATGTGATC 249
||||.||||||||.|||||.|||||.||||...|||||.||||.|..||.
BPUM_2555___i 200 CTTACAATAAAACTGGTGAATGGCTTCCTGAGCAAACACTAGAAGACATT 249
BSNT_04253___ 250 CGCGAATATTTCATCGCGATTAAAGGCCCGTTAACGACACCTGTCGGCGG 299
||.|||||.||.|||||.||.|||||.||..||||.|||||..|||||||
BPUM_2555___i 250 CGTGAATACTTAATCGCAATCAAAGGACCACTAACAACACCAATCGGCGG 299
BSNT_04253___ 300 CGGTATCCGTTCTTTGAACGTAGCGCTCAGACAAGAGCTTGACCTATTCG 349
.||.||||||||.||.|||||.||.||.||||||||||||||.||||||.
BPUM_2555___i 300 AGGAATCCGTTCATTAAACGTGGCACTTAGACAAGAGCTTGATCTATTCA 349
BSNT_04253___ 350 TCTGCTTAAGACCTGTAAGATACTTTACTGGAGTGCCGTCACCGGTAAAA 399
..||||||.|.||.||..|.|..||.|..||.||.|||||.||.||.|||
BPUM_2555___i 350 CATGCTTACGTCCAGTTCGCTGGTTCAAAGGCGTACCGTCTCCTGTGAAA 399
BSNT_04253___ 400 CGCCCTGAAGATACTGATATGGTCATCTTCCGTGAAAATACAGAAGATAT 449
||.||.|||||.||.||||||||||||||||||||.||||||||||||||
BPUM_2555___i 400 CGTCCAGAAGACACAGATATGGTCATCTTCCGTGAGAATACAGAAGATAT 449
BSNT_04253___ 450 TTACGCAGGCATCGAGTATGCAAAAGGCTCTGAAGAAGTGCAAAAGCTTA 499
.||.||.||.|||||||||||||||||.||.||.||||||.|.|||.|.|
BPUM_2555___i 450 CTATGCTGGTATCGAGTATGCAAAAGGATCAGACGAAGTGAAGAAGTTAA 499
BSNT_04253___ 500 TCAGCTTCCTTCAAAATGAGTTAAACGTCAATAAAATCCGTTTCCCTGAG 549
|...||||.|..||||.||.|||...||.||.||||||||||||||.||.
BPUM_2555___i 500 TTGACTTCTTGAAAAACGAATTAGGTGTAAACAAAATCCGTTTCCCAGAA 549
BSNT_04253___ 550 ACATCAGGTATCGGCATTAAGCCTGTTTCAGAAGAAGGAACAAGCCGCTT 599
||||||||||||||.||.|||||.|||||.|||||||||||....|||.|
BPUM_2555___i 550 ACATCAGGTATCGGAATCAAGCCAGTTTCTGAAGAAGGAACTTCTCGCCT 599
BSNT_04253___ 600 GGTCAGAGCTGCCATTGATTATGCGATCGAGCATGGCCGCAAATCTGTAA 649
.||.|||||.||.||..|.|||||.|||||.||.|||||.||.|||||.|
BPUM_2555___i 600 TGTTAGAGCGGCTATCCAATATGCAATCGACCAAGGCCGTAAGTCTGTGA 649
BSNT_04253___ 650 CGCTTGTTCACAAAGGAAACATCATGAAGTTCACAGAAGGCGCGTTCAAA 699
||||||||||||||||||||||||||||.||.||||||||.||.||||||
BPUM_2555___i 650 CGCTTGTTCACAAAGGAAACATCATGAAATTTACAGAAGGAGCCTTCAAA 699
BSNT_04253___ 700 AACTGGGGCTATGAACTTGCTGAAAAAGAATACGGAGATAAAGTCTTCAC 749
|||||||||||.|||.|.|||||||||||.|..||.||.||.|||||.||
BPUM_2555___i 700 AACTGGGGCTACGAAGTGGCTGAAAAAGAGTTTGGCGACAAGGTCTTTAC 749
BSNT_04253___ 750 ATGGGCTCAATATGACCGCATTGCTGAAGAAGAAGGAAAAGACGCTGCCA 799
||||||.||||||||.||.||||..|||.||||.||||||||.||.||.|
BPUM_2555___i 750 ATGGGCACAATATGATCGTATTGTAGAACAAGATGGAAAAGATGCGGCAA 799
BSNT_04253___ 800 ACAAAGCGCAAAGCGAAGCGGAAGCAGCAGGAAAAATCATTATCAAAGAC 849
|||||||||||||.|||||.|||||.||.||.|||||.|||.||||||||
BPUM_2555___i 800 ACAAAGCGCAAAGTGAAGCAGAAGCTGCTGGCAAAATTATTGTCAAAGAC 849
BSNT_04253___ 850 AGCATTGCTGACATTTTCCTTCAGCAGATCTTAACGCGTCCAAACGAGTT 899
||||||||.||.|||||||||||.||.|||.||||.|||||....|||||
BPUM_2555___i 850 AGCATTGCAGATATTTTCCTTCAACAAATCCTAACTCGTCCGGCTGAGTT 899
BSNT_04253___ 900 TGATGTCGTTGCGACAATGAACTTGAACGGAGATTACATTTCTGATGCTC 949
.|||||.||.||.|||||||||||.||||||||||||||.||||||||||
BPUM_2555___i 900 CGATGTTGTGGCAACAATGAACTTAAACGGAGATTACATCTCTGATGCTC 949
BSNT_04253___ 950 TTGCTGCGCAAGTCGGCGGAATCGGCATTGCTCCTGGAGCGAACATCAAC 999
||||.||.|||||.||.|||||.||.||.||.||.||.||||||||||||
BPUM_2555___i 950 TTGCAGCACAAGTTGGTGGAATTGGTATCGCACCAGGTGCGAACATCAAC 999
BSNT_04253___ 1000 TACGAAACAGGACATGCGATTTTCGAGGCGACGCACGGAACGGCTCCTAA 1049
||||||||||||||.||.|||||.||.|||||.||||||||.||.|||||
BPUM_2555___i 1000 TACGAAACAGGACACGCTATTTTTGAAGCGACTCACGGAACAGCACCTAA 1049
BSNT_04253___ 1050 ATATGCAGGCCTTGATAAAGTAAACCCATCTTCAGTTATTCTTTCAGGCG 1099
||||||.||.|||||||||||.|||||||||||.|||.||||.|||||||
BPUM_2555___i 1050 ATATGCTGGTCTTGATAAAGTGAACCCATCTTCTGTTCTTCTATCAGGCG 1099
BSNT_04253___ 1100 TTCTGCTTCTTGAGCATTTAGGATGGAACGAAGCGGCTGATTTGGTTATC 1149
|.||..|.||||||||..|.||||||.|.|||||.||||||.|.||.||.
BPUM_2555___i 1100 TGCTTTTACTTGAGCACCTTGGATGGCAGGAAGCAGCTGATCTAGTGATT 1149
BSNT_04253___ 1150 AAATCTATGGAAAAAACAATCGCTTCCAAAGTCGTAACTTACGATTTTGC 1199
.|||||.|.|||||.|||||.||.||.||||||||.||||||||||||||
BPUM_2555___i 1150 CAATCTGTTGAAAATACAATTGCATCAAAAGTCGTTACTTACGATTTTGC 1199
BSNT_04253___ 1200 CAGATTAATGGACGGGGCGACTGAAGTGAAATGTTCAGAGTTCGGAGAAG 1249
.|||||||||||.||.||.||.||||||||||||||.|||||.|..||.|
BPUM_2555___i 1200 TAGATTAATGGATGGCGCAACAGAAGTGAAATGTTCTGAGTTTGCTGACG 1249
BSNT_04253___ 1250 AACTGATCAAAAACATG----GACTAA 1272
|.||.|||||||||.|| ||
BPUM_2555___i 1250 AGCTCATCAAAAACTTGTCTTGA---- 1272
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.