Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04252 and BPUM_2554
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_04252___mdh.1.24716.seq
# -bsequence dna-align/BPUM_2554___mdh.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04252___mdh-BPUM_2554___mdh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04252___mdh-BPUM_2554___mdh.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04252___mdh
# 2: BPUM_2554___mdh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 940
# Identity: 738/940 (78.5%)
# Similarity: 738/940 (78.5%)
# Gaps: 2/940 ( 0.2%)
# Score: 2870.0
#
#
#=======================================
BSNT_04252___ 1 ATGGGAAATACTCGTAAAAAAGTTTCTGTTATCGGAGCAGGTTTTACCGG 50
||||.|||.|..|||||||||||.||||||||||||||.||.|||||.||
BPUM_2554___m 1 ATGGCAAACAAGCGTAAAAAAGTATCTGTTATCGGAGCGGGCTTTACTGG 50
BSNT_04252___ 51 AGCTACAACTGCATTTTTAATCGCTCAAAAAGAGCTGGCAGACGTTGTTC 100
|||.||.||.||||||.|||..|||||||||||..|.||.|||||.||..
BPUM_2554___m 51 AGCAACTACAGCATTTCTAACGGCTCAAAAAGAATTAGCGGACGTCGTAT 100
BSNT_04252___ 101 TTGTTGACATTCCGCAATTGGAGAACCCGACAAAGGGAAAAGCGCTTGAT 150
|.||.||.||.|||||..|.||||||||.|||||.||.|||||.||||||
BPUM_2554___m 101 TAGTCGATATCCCGCAGCTTGAGAACCCAACAAAAGGGAAAGCACTTGAT 150
BSNT_04252___ 151 ATGCTTGAAGCAAGCCCGGTTCAAGGCTTTGACGCAAAAATTACGGGAAC 200
|||||.||||||||.||.|||||||||||.||.|||||.|||||.|||||
BPUM_2554___m 151 ATGCTGGAAGCAAGTCCAGTTCAAGGCTTCGATGCAAACATTACAGGAAC 200
BSNT_04252___ 201 ATCCAATTACGAGGATACAGCTGGCTCTGACATTGTTGTCATTACAGCCG 250
.||.||.|||||.||||||||.||.|||||..||||.||||||||.||.|
BPUM_2554___m 201 TTCTAACTACGAAGATACAGCCGGTTCTGATGTTGTGGTCATTACGGCGG 250
BSNT_04252___ 251 GTATCGCAAGAAAACCTGGTATGAGCAGAGATGATCTGGTCTCTTCAAAC 300
|.||.||||||||.||.||.||||||.|.||.|||||.||.||..||||.
BPUM_2554___m 251 GAATTGCAAGAAAGCCGGGAATGAGCCGTGACGATCTTGTGTCAACAAAT 300
BSNT_04252___ 301 GAAAAGATTATGAGAAGCGTTACCCGGGAAATCGTGAAATATTCTCCTGA 350
|||||.||.|||.|.||.||.||.||.||||||||.|||||||||||.||
BPUM_2554___m 301 GAAAAAATCATGCGTAGTGTGACACGCGAAATCGTTAAATATTCTCCAGA 350
BSNT_04252___ 351 CTCTATTATTGTGGTGCTGACAAATCCTGTTGATGCAATGACATACGCGG 400
..|.||.|||||.||..|.|||||.|||||||||||||||||.||.||.|
BPUM_2554___m 351 AGCGATCATTGTTGTATTAACAAACCCTGTTGATGCAATGACGTATGCAG 400
BSNT_04252___ 401 TGTACAAAGAATCAGGCTTCCCTAAAGAGCGTGTAATCGGCCAGTCCGGT 450
|.||.|||||||||||.||.||.||.||....||.||.||.||.||.|||
BPUM_2554___m 401 TTTATAAAGAATCAGGATTACCAAAGGAAAAAGTCATTGGACAATCGGGT 450
BSNT_04252___ 451 GTGCTTGATACGGCAAGATTCAGAACATTTGTGGCAGAGGAATTAAACCT 500
.|.||||||||.|||.|.|||.|.||.||.||.||..|.|||||||||||
BPUM_2554___m 451 ATTCTTGATACAGCACGTTTCCGCACGTTCGTTGCTCAAGAATTAAACCT 500
BSNT_04252___ 501 GTCAGTGAAAGATGTGACTGGTTTCGTACTCGGCGGACACGGTGACGATA 550
.||.||.|||||.|||||.||.||.|||||.||.|||||.|||||.||.|
BPUM_2554___m 501 ATCTGTTAAAGACGTGACGGGCTTTGTACTTGGTGGACATGGTGATGACA 550
BSNT_04252___ 551 TGGTGCCGCTTGTGCGTTATTCTTATGCTGGCGGTATCCCGCTTGAAACT 600
||||.||.|||||.|||||.||||||||.||||||||||||||||||||.
BPUM_2554___m 551 TGGTTCCTCTTGTTCGTTACTCTTATGCAGGCGGTATCCCGCTTGAAACA 600
BSNT_04252___ 601 CTTATTCCGAAAGAACGGATTGACGCAATTGTGGAGCGCACTAGAAAAGG 650
.|.|||||.|||||.||.|||||.||||||||.||..|.||.||||||||
BPUM_2554___m 601 TTGATTCCTAAAGAGCGAATTGATGCAATTGTTGAAAGAACAAGAAAAGG 650
BSNT_04252___ 651 CGGAGGCGAAATCGTGAATCTTCTTGGAAACGGAAGCGCGTATTATGCGC 700
.||.|||||||||||.||.||..|.||.|||||.||.||.||||||||.|
BPUM_2554___m 651 TGGCGGCGAAATCGTAAACCTATTAGGTAACGGTAGTGCCTATTATGCTC 700
BSNT_04252___ 701 CTGCGGCTTCTCT-GACAGAAATGGTCGAAGCGATCTTGAAAGATCAGCG 749
||||.|||||.|| |.| ||||||||.||.||||||.|.|||||||||||
BPUM_2554___m 701 CTGCTGCTTCACTAGTC-GAAATGGTTGAGGCGATCCTTAAAGATCAGCG 749
BSNT_04252___ 750 CCGCGTCCTTCCTACAATTGCTTATCTTGAAGGGGAATACGGCTATGAAG 799
|||||||.|.||.||.||||||||.||||||||.|||||.|||||.||||
BPUM_2554___m 750 CCGCGTCATGCCAACGATTGCTTACCTTGAAGGTGAATATGGCTACGAAG 799
BSNT_04252___ 800 GCATCTACCTTGGTGTTCCTACAATTATAGGCGGCAACGGTCTTGAGCAA 849
||||.|||||.|||||.||.|||||..||||.||.|||||.||||||||.
BPUM_2554___m 800 GCATTTACCTAGGTGTACCAACAATCGTAGGTGGAAACGGCCTTGAGCAG 849
BSNT_04252___ 850 ATCATTGAACTTGAACTGACAGACTATGAAAGAGCGCAGCTGAATAAATC 899
|||||.||.|||||.||||||||..|.||||||...|||||..|....||
BPUM_2554___m 850 ATCATCGAGCTTGAGCTGACAGAAGAAGAAAGAAGTCAGCTTGACCGTTC 899
BSNT_04252___ 900 AGTAGAATCTGTCAAAAATGTCATGAAAGTATTATCCTAA 939
.||.||||||||.||.|||||||||||||||||.||.|||
BPUM_2554___m 900 TGTTGAATCTGTTAAGAATGTCATGAAAGTATTGTCTTAA 939
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