Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04237 and BPUM_2546
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:45
# Commandline: needle
# -asequence dna-align/BSNT_04237___speD.1.24716.seq
# -bsequence dna-align/BPUM_2546___speD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04237___speD-BPUM_2546___speD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04237___speD-BPUM_2546___speD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04237___speD
# 2: BPUM_2546___speD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 321/384 (83.6%)
# Similarity: 321/384 (83.6%)
# Gaps: 3/384 ( 0.8%)
# Score: 1365.0
#
#
#=======================================
BSNT_04237___ 1 ---ATGGAAACAATGGGGCGTCACGTTATCTCCGAGCTATGGGGATGCGA 47
|||||||||||.||.||||||||||||||||||.|||||||||||||
BPUM_2546___s 1 ATGATGGAAACAATCGGACGTCACGTTATCTCCGAGTTATGGGGATGCGA 50
BSNT_04237___ 48 TTTTGATAAGCTGAATGACATGGATTTTATTGAAAAAACGTTTGTAAATG 97
.|.||||||.|||||.||||||||||||||||||||||||||||||||||
BPUM_2546___s 51 CTGTGATAAACTGAACGACATGGATTTTATTGAAAAAACGTTTGTAAATG 100
BSNT_04237___ 98 CTGCTCTAAAATCAGGTGCTGAGGTGCGCGAGGTTGCATTTCACAAATTT 147
|.|||.|.||||||||.||||||||..|.||||||||.||||||||||||
BPUM_2546___s 101 CAGCTTTGAAATCAGGAGCTGAGGTAAGAGAGGTTGCTTTTCACAAATTT 150
BSNT_04237___ 148 GCACCGCAAGGCGTAAGCGGAGTTGTGATTATTTCTGAATCACACTTAAC 197
|||||.|||||.|||||.||||||||.||||||||||||||.||..|.||
BPUM_2546___s 151 GCACCTCAAGGAGTAAGTGGAGTTGTCATTATTTCTGAATCTCATCTGAC 200
BSNT_04237___ 198 GATTCACAGTTTTCCTGAGCACGGATATGCGAGCATTGATGTTTATACTT 247
.||||||||.||||||||.||.||.|||||||||||.|||||||||||||
BPUM_2546___s 201 AATTCACAGCTTTCCTGAACATGGTTATGCGAGCATAGATGTTTATACTT 250
BSNT_04237___ 248 GTGGAGACTTAGATCCTAATGTCGCTGCTGATTACATTGCAGAGGCATTA 297
|.||.|||.|||||||.|||.|.||.||.|||.|.||.|.|||.|.||||
BPUM_2546___s 251 GCGGCGACCTAGATCCGAATATTGCAGCAGATCATATCGGAGATGAATTA 300
BSNT_04237___ 298 CATGCTGATACAAGAGAAAACATTGAAATACCAAGAGGAATGGGGCCTGT 347
..||||||.||||||||||||||.|||||.||..||||.|||||.|||||
BPUM_2546___s 301 GGTGCTGAAACAAGAGAAAACATCGAAATTCCTCGAGGCATGGGACCTGT 350
BSNT_04237___ 348 GCAAATTAAACAGGCGCAAGCGAAAGTACTATAA 381
.|||.|.||||||||.||||..||||.|||.|||
BPUM_2546___s 351 ACAAGTGAAACAGGCACAAGTCAAAGCACTGTAA 384
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