Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04216 and BPUM_2533
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_04216___lrgB.1.24716.seq
# -bsequence dna-align/BPUM_2533___ysbB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04216___lrgB-BPUM_2533___ysbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04216___lrgB-BPUM_2533___ysbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04216___lrgB
# 2: BPUM_2533___ysbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 702
# Identity: 520/702 (74.1%)
# Similarity: 520/702 (74.1%)
# Gaps: 12/702 ( 1.7%)
# Score: 1868.0
#
#
#=======================================
BSNT_04216___ 1 ATGG---AAAGCACAATGAGTCCTTATTTTGGGATTGTCGTATCACTTGC 47
|||| .|||.||||||||||||||||||||.||.|||||.|||.|.|.
BPUM_2533___y 1 ATGGGTACAAGTACAATGAGTCCTTATTTTGGTATAGTCGTCTCATTAGT 50
BSNT_04216___ 48 TGCATTCGGCATCGGCACCTTTTTATTTAAGAAAACGAAAGGCTTCTTCC 97
.||.||.||.|||||.||.||.||||||||.|||.|.||||||||||||.
BPUM_2533___y 51 CGCCTTTGGAATCGGTACATTCTTATTTAAAAAATCAAAAGGCTTCTTCT 100
BSNT_04216___ 98 TTTTCACTCCTTTGTTTGTTGCCATGGTGCTGGGGATCGCATTTTTAAAA 147
|.|||||.||..|||||||.||||||.||.|.||.||...||||||||||
BPUM_2533___y 101 TATTCACACCACTGTTTGTAGCCATGTTGTTAGGTATTTTATTTTTAAAA 150
BSNT_04216___ 148 ATCGGCGGTTTTTCCTACGCGGATTATAATAACGGGGGAGAGATCATTAA 197
||.||||||||||||||.||.|||||||||.|.||.||..||||.||.||
BPUM_2533___y 151 ATTGGCGGTTTTTCCTATGCAGATTATAATGAGGGCGGCAAGATTATCAA 200
BSNT_04216___ 198 GTTTTTCCTTGAACCGGCAACGATCGCATTTGCAATTCCTTTGTACAAAC 247
|||||||.|.||.||.||.||.||.||.||.||.|||||..|.||.||.|
BPUM_2533___y 201 GTTTTTCTTAGAGCCCGCGACCATTGCTTTCGCTATTCCGCTTTATAAGC 250
BSNT_04216___ 248 AAAGAG-ATAAGCTTAAAAAATACTGGTGGCAAATCATGGCCTCCATTAT 296
|..|.| || .||||||||||||.||||||||.||..|..||.|.|||.|
BPUM_2533___y 251 AGCGTGCAT-TGCTTAAAAAATATTGGTGGCAGATTTTATCCGCTATTTT 299
BSNT_04216___ 297 TGCCGGCTCTATCTGCTCTGTCACGATTGTTTATTTGCTCGCTAAAGGCA 346
||..||.||..|.||.||..|.||.|||||.|||.|..|.||.|||||.|
BPUM_2533___y 300 TGTAGGATCACTTTGTTCCATTACAATTGTGTATGTCGTAGCAAAAGGAA 349
BSNT_04216___ 347 TTCATCTCGATTCGGCCGTAATGAAAAGCATGCTTCCGCAGGCGGCTACA 396
|||||||.|||.|.||.||.||||||||.|||||.||.|||||.||.||.
BPUM_2533___y 350 TTCATCTTGATGCAGCTGTCATGAAAAGTATGCTCCCACAGGCAGCGACG 399
BSNT_04216___ 397 ACGGCAATTGCGCTTCCTTTATCAAAAGGCATCGGGGGCAT--CAGCGAC 444
||.||.|||||.|||||..|..||||.|..||.||.||.|| || ||.
BPUM_2533___y 400 ACAGCGATTGCTCTTCCGATTGCAAAGGATATTGGCGGAATTGCA--GAT 447
BSNT_04216___ 445 ATCACAGCCTTTGCGGTCATCTTTAACGCTGTCATCGTATATGCGCTCGG 494
||||||||||||||||||||.|||||.||.||||||||.||||||||.||
BPUM_2533___y 448 ATCACAGCCTTTGCGGTCATATTTAATGCAGTCATCGTGTATGCGCTAGG 497
BSNT_04216___ 495 AGCATTGTTCTTGAAGGTGTTTAAAGTGAAAAATCCGATTTCTAAAGGAT 544
.||.||.|||||.||...||||..|.|.||||||||..|..|.|||||..
BPUM_2533___y 498 TGCTTTCTTCTTAAAATGGTTTCGAATTAAAAATCCAGTGGCAAAAGGGC 547
BSNT_04216___ 545 TGGCTCTTGGAACATCCGGACATGCACTTGGTGTAGCGGTCGGGATTGAG 594
|.||.|||||.|||||.||||||||||||||.||..|.||.||.||||||
BPUM_2533___y 548 TTGCACTTGGTACATCTGGACATGCACTTGGCGTCTCTGTTGGAATTGAG 597
BSNT_04216___ 595 ATGGGAGAAGTTGAAGCTGCGATGGCAAGTATTGCTGTTGTCGTAGTAGG 644
|||||.|||||.|||||.||.|||||||||||.||.|||||.||.|||||
BPUM_2533___y 598 ATGGGTGAAGTAGAAGCGGCCATGGCAAGTATCGCCGTTGTGGTCGTAGG 647
BSNT_04216___ 645 AGTGGTAACGGTTTTGGTCATCCCTGTGTTCGTGCAGCTGATCGGTGGAT 694
|||.||.||.||..|.||||||||..|.||..||||..|.|||..|.||
BPUM_2533___y 648 AGTTGTGACCGTCATTGTCATCCCAATCTTTATGCAATTCATCCTTTGA- 696
BSNT_04216___ 695 AA 696
BPUM_2533___y 696 -- 696
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