Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04213 and BPUM_2531
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_04213___rpmI.1.24716.seq
# -bsequence dna-align/BPUM_2531___rpmI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04213___rpmI-BPUM_2531___rpmI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04213___rpmI-BPUM_2531___rpmI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04213___rpmI
# 2: BPUM_2531___rpmI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 173/201 (86.1%)
# Similarity: 173/201 (86.1%)
# Gaps: 0/201 ( 0.0%)
# Score: 753.0
#
#
#=======================================
BSNT_04213___ 1 ATGCCAAAAATGAAAACTCACCGCGGATCTGCTAAACGTTTTAAAAAGAC 50
|||||||||||||||||||||||||||||||||||||||||.|||||.||
BPUM_2531___r 1 ATGCCAAAAATGAAAACTCACCGCGGATCTGCTAAACGTTTCAAAAAAAC 50
BSNT_04213___ 51 AGGTTCTGGGAAGTTAAAACGTTCTCACGCGTACACAAGTCACTTATTCG 100
|||||||||.||..|.|||||||||||.|||||||||||||||||.||||
BPUM_2531___r 51 AGGTTCTGGTAAACTTAAACGTTCTCATGCGTACACAAGTCACTTGTTCG 100
BSNT_04213___ 101 CCAACAAATCTCAAAAGCAAAAGCGTAAGCTTCGCAAGAGTGCTGTTGTA 150
|.|||||||||..|||||||||.|||||..|.||.|||||.||..|.|||
BPUM_2531___r 101 CTAACAAATCTACAAAGCAAAAACGTAAATTGCGTAAGAGCGCAATCGTA 150
BSNT_04213___ 151 AGCGCAGGAGACTTCAAACGTATCAAACAAATGCTTGCTAACATCAAGTA 200
||.||.|||||.||||||||.|||||||||...|||||.|||||||||||
BPUM_2531___r 151 AGTGCTGGAGATTTCAAACGCATCAAACAACAACTTGCAAACATCAAGTA 200
BSNT_04213___ 201 A 201
|
BPUM_2531___r 201 A 201
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