Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04211 and BPUM_2530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_04211___rplT.1.24716.seq
# -bsequence dna-align/BPUM_2530___rplT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04211___rplT-BPUM_2530___rplT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04211___rplT-BPUM_2530___rplT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04211___rplT
# 2: BPUM_2530___rplT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity: 329/360 (91.4%)
# Similarity: 329/360 (91.4%)
# Gaps: 0/360 ( 0.0%)
# Score: 1521.0
#
#
#=======================================
BSNT_04211___ 1 ATGCCAAGAGTAAAAGGCGGAACTGTTACACGTAAGCGTCGTAAAAAGGT 50
||||||||||||||||||||||||||..|.|||.||||||||||||||||
BPUM_2530___r 1 ATGCCAAGAGTAAAAGGCGGAACTGTGTCGCGTCAGCGTCGTAAAAAGGT 50
BSNT_04211___ 51 TCTTAAATTAGCAAAAGGTTATTTCGGTTCAAAACATACATTATACAAAG 100
||||||||||||||||||||||||||||||||||||||.||||||.||||
BPUM_2530___r 51 TCTTAAATTAGCAAAAGGTTATTTCGGTTCAAAACATAGATTATATAAAG 100
BSNT_04211___ 101 TAGCTAACCAGCAGGTCATGAAATCTGGAAACTATGCTTTCCGTGACCGT 150
||||.|||||.|||||.|||||||||||||||||.|||||||||||||||
BPUM_2530___r 101 TAGCAAACCAACAGGTGATGAAATCTGGAAACTACGCTTTCCGTGACCGT 150
BSNT_04211___ 151 CGTCAGAAAAAACGTGATTTCCGTAAACTTTGGATCACTCGTATCAACGC 200
|||||||||||||||||.|||||||||||.|||||||||||||||||.||
BPUM_2530___r 151 CGTCAGAAAAAACGTGACTTCCGTAAACTATGGATCACTCGTATCAATGC 200
BSNT_04211___ 201 AGCTGCTCGCATGAACGGCCTTTCTTACAGCCGTTTAATGCACGGTCTTA 250
.||.||||||||||||||.|||||||||||||||||||||||.||.||.|
BPUM_2530___r 201 TGCAGCTCGCATGAACGGTCTTTCTTACAGCCGTTTAATGCATGGCCTAA 250
BSNT_04211___ 251 AGCTTTCTGGTATCGAAGTAAACCGTAAAATGCTTGCTGATCTTGCTGTA 300
|||||||||||||||||||||||||.||||||||||||||.||||||||.
BPUM_2530___r 251 AGCTTTCTGGTATCGAAGTAAACCGCAAAATGCTTGCTGACCTTGCTGTG 300
BSNT_04211___ 301 AACGATCTTACTGCATTCAACCAGCTTGCTGATGCTGCTAAAGCTCAATT 350
||.||.||.|.|||||||||.|||||||||||||||||.|||||.|||.|
BPUM_2530___r 301 AATGACCTAAGTGCATTCAATCAGCTTGCTGATGCTGCAAAAGCACAACT 350
BSNT_04211___ 351 AAACAAGTAA 360
|.||||||||
BPUM_2530___r 351 AGACAAGTAA 360
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