Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04183 and BPUM_2524
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:42
# Commandline: needle
# -asequence dna-align/BSNT_04183___sspI.1.24716.seq
# -bsequence dna-align/BPUM_2524___sspI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04183___sspI-BPUM_2524___sspI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04183___sspI-BPUM_2524___sspI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04183___sspI
# 2: BPUM_2524___sspI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 164/225 (72.9%)
# Similarity: 164/225 (72.9%)
# Gaps: 12/225 ( 5.3%)
# Score: 580.0
#
#
#=======================================
BSNT_04183___ 1 ATGGATCTTAATTTACGTCATGCCGTCATTGCCAATGTCACCGGCAATAA 50
||||||.||||||||.|....||.||||||...||..|.||.|||.||||
BPUM_2524___s 1 ATGGATTTTAATTTAAGAGGCGCAGTCATTCAAAACATTACTGGCCATAA 50
BSNT_04183___ 51 TCAGGAGCAGCTTGAGCATACAATCGTAGATGCGATTCAAAGCGGTGAAG 100
|||.||.||||||||||||||.||..|||||||.||||||||||||||.|
BPUM_2524___s 51 TCAAGAACAGCTTGAGCATACGATTTTAGATGCCATTCAAAGCGGTGAGG 100
BSNT_04183___ 101 AAAAAATGCTTCCAGGGCTCGGCGTTTTATTCGAAGTCATTTGGCAGCAC 150
||||||||.|.|||||.||.|||||.||.||.|||||..|.|||||..|.
BPUM_2524___s 101 AAAAAATGTTGCCAGGCCTTGGCGTGTTGTTTGAAGTGCTATGGCAAGAA 150
BSNT_04183___ 151 GCATCCGAAAGTGAGAAAAACGAAATGCTGAAAACGCTTG---AAGGCGG 197
|||||.||||..|||||.|||||.||.||..||||..|.| |||||
BPUM_2524___s 151 GCATCAGAAAACGAGAAGAACGAGATTCTTGAAACATTAGAGCAAGGC-- 198
BSNT_04183___ 198 ATTAAA-----ACCCGCCG-AATAA 216
||||| |.|.||.| |||||
BPUM_2524___s 199 -TTAAAGCCTCATCAGCAGCAATAA 222
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