Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04180 and BPUM_2522
See
Amino acid alignment /
Visit
BSNT_04180 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:42
# Commandline: needle
# -asequence dna-align/BSNT_04180___pheS.1.24716.seq
# -bsequence dna-align/BPUM_2522___pheS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04180___pheS-BPUM_2522___pheS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04180___pheS-BPUM_2522___pheS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04180___pheS
# 2: BPUM_2522___pheS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1040
# Identity: 805/1040 (77.4%)
# Similarity: 805/1040 (77.4%)
# Gaps: 10/1040 ( 1.0%)
# Score: 3063.0
#
#
#=======================================
BSNT_04180___ 1 ATGGAAGAAAAGCTAAAACAGCTGGAACAAGAAGCTTTAGAACAAGTAGA 50
|||.||||||.|.||||||||||.|||..||||||..|||...|.||.||
BPUM_2522___p 1 ATGCAAGAAACGTTAAAACAGCTTGAAACAGAAGCGATAGCGAAGGTTGA 50
BSNT_04180___ 51 AGCGGCAAGCTCATTGAAGGTTGTCAATGATATTCGGGTGCAATATCTCG 100
|||.||.|||||..|.||.|..||||||||.||.||.||.||||||.|.|
BPUM_2522___p 51 AGCAGCTAGCTCGCTCAAAGAAGTCAATGACATACGTGTTCAATATTTAG 100
BSNT_04180___ 101 GAAAAAAAGGGCCGATTACAGAAGTGCTGCGCGGAATGGGCAAGCTTTCT 150
|.||||||||.|||||.|||||.||.||.|||||||||||||||||.||.
BPUM_2522___p 101 GGAAAAAAGGACCGATCACAGAGGTACTCCGCGGAATGGGCAAGCTCTCC 150
BSNT_04180___ 151 GCTGAGGAACGTCCAAAAATGGGGGCCCTCGCGAACGAAGTAAGGGAGCG 200
||.||.|||.|.||.||||||||.||.|||||.||||||||.||.||||.
BPUM_2522___p 151 GCAGAAGAAAGACCGAAAATGGGCGCACTCGCAAACGAAGTGAGAGAGCA 200
BSNT_04180___ 201 TATTGCCAATGCGATTGCTGACAAAAACGAGAAGCTTGAAGAAGAGGAAA 250
.|||||...|||.||||||||.|||||.||..||||.|||.||||.|||.
BPUM_2522___p 201 GATTGCTGGTGCTATTGCTGAAAAAAATGAACAGCTGGAAAAAGAAGAAG 250
BSNT_04180___ 251 TGAAACAGAAGCTTGCAGGACAGACAATTGACGTCACGCTGCCGGGGAAC 300
||||..||||.|||||....||.||.||.||.||.||..||||.|..||.
BPUM_2522___p 251 TGAAGAAGAAACTTGCGTCTCAAACGATCGATGTGACATTGCCAGCAAAT 300
BSNT_04180___ 301 CCTGTTGCAGTCGGCGGC-CGCCATCCGCTCACTGTTGTCATTGAAGAAA 349
||..|...|.|.|| ||| .|.|||||..|.||..||||..|||||||.|
BPUM_2522___p 301 CCAATCAAAATAGG-GGCAAGACATCCATTAACGATTGTTGTTGAAGATA 349
BSNT_04180___ 350 TTGAAGATTTATTTATCGGTATGGGCTACACAGTCGAGGAAGGGCCAGAG 399
||||||||||||||||.||.||||||||.||.||.||.|||||.||.|||
BPUM_2522___p 350 TTGAAGATTTATTTATTGGCATGGGCTATACCGTTGAAGAAGGTCCTGAG 399
BSNT_04180___ 400 GTTGAAACGGATTACTACAACTTCGAATCGCTCAATCTTCCGAAAGAACA 449
||.||||||||||||||.|||||.|||.||.|.||||||||.||.||.||
BPUM_2522___p 400 GTAGAAACGGATTACTATAACTTTGAAGCGTTGAATCTTCCAAAGGAGCA 449
BSNT_04180___ 450 CCCTGCGCGCGATATGCAGGACAGCTTTTACATCACAGAGGAAACTTTGA 499
.||.||.||.|||||||||||||||||.|||||.||.|||||.||..||.
BPUM_2522___p 450 TCCGGCACGTGATATGCAGGACAGCTTCTACATTACCGAGGATACACTGC 499
BSNT_04180___ 500 TGAGAACGCAAACTTCTCCTGTCCAAACACGGACGATGGAAAAGCATAAA 549
|.|||||.|||||.||.||.||.|||.|.||.||..|.|||||..|||||
BPUM_2522___p 500 TCAGAACACAAACGTCACCAGTTCAAGCGCGTACACTTGAAAAATATAAA 549
BSNT_04180___ 550 GGCAAAGGTCCCGTTAAAATCATTTGCCCGGGTAAAGTATATCGCCGTGA 599
||..|||||||.||.||||||||||||||.||.|||||||||.|.||.||
BPUM_2522___p 550 GGACAAGGTCCTGTGAAAATCATTTGCCCTGGGAAAGTATATAGACGAGA 599
BSNT_04180___ 600 TAACGATGATGCGACGCACTCTCACCAATTTATGCAAATTGAAGGGCTTG 649
.|..|||||.|||||.||.||.||.|||||||||||.|||||||||||||
BPUM_2522___p 600 CAGTGATGACGCGACTCATTCACATCAATTTATGCAGATTGAAGGGCTTG 649
BSNT_04180___ 650 TCGTTGACAAAAACATCAGCATGAGTGATTTAAAAGGAACGCTTGAACTC 699
|.|||||..|.||.||.||||||||||||.|||||||.|||||||||...
BPUM_2522___p 650 TTGTTGATCACAATATTAGCATGAGTGATCTAAAAGGTACGCTTGAAACA 699
BSNT_04180___ 700 GTTGCGAAAAAAATGTTCGGGCAAGACCGTGAAATCAGACTCCGCCCAAG 749
||.||.|.|||||||||.||..||||.||||||||.|||||.||.|||||
BPUM_2522___p 700 GTCGCAAGAAAAATGTTTGGTGAAGATCGTGAAATTAGACTGCGTCCAAG 749
BSNT_04180___ 750 CTTCTTCCCGTTTACTGAGCCTTCAGTAGAAGTGGATGTGACATGCTTTA 799
|||.|||||.||.||.||.||.||.|||||||||||||||.|.|||||||
BPUM_2522___p 750 CTTTTTCCCATTCACAGAACCATCTGTAGAAGTGGATGTGTCTTGCTTTA 799
BSNT_04180___ 800 AATGTGGTGGAAACGGCTGCTCAGTATGTAAAGGAACAGGCTGGATTGAA 849
|||||||.|||||.|||||.||.||||||||||||||||||||||||||.
BPUM_2522___p 800 AATGTGGAGGAAAAGGCTGTTCTGTATGTAAAGGAACAGGCTGGATTGAG 849
BSNT_04180___ 850 ATCCTCGGTGCCGGAATGGTTCACCCGAACGTGCTTAAAATG-GCTGGCT 898
||..|.||.||.|||||||||||.|||||.||.||.|||||| || ||.|
BPUM_2522___p 850 ATTTTAGGAGCTGGAATGGTTCATCCGAATGTCCTGAAAATGAGC-GGAT 898
BSNT_04180___ 899 TTGATCCGAAGGAA---TATCAGGGCTTCGCATTCGGAATGGGTGTTGAG 945
||||||| |||| ||.||.|||||.||.||.||||||||||||||.
BPUM_2522___p 899 TTGATCC---GGAAACTTACCAAGGCTTTGCTTTTGGAATGGGTGTTGAA 945
BSNT_04180___ 946 CGCATCGCGATGCTGAAATACGGCATTGATGATATCCGCCACTTCTATAC 995
||.||.||||||||.||||||||||||||||||||.||.||.|||||.||
BPUM_2522___p 946 CGGATTGCGATGCTCAAATACGGCATTGATGATATTCGTCATTTCTACAC 995
BSNT_04180___ 996 AAACGATGTCAGATTTATTTCGCAGTTTAAACAGGCGTAA 1035
|||.|||.|.|||||.|....|||.||.||.||||..|||
BPUM_2522___p 996 AAATGATATTAGATTCACAAAGCAATTCAAGCAGGACTAA 1035
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.