Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04170 and BPUM_2515
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_04170___yshE.1.24716.seq
# -bsequence dna-align/BPUM_2515___yshE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04170___yshE-BPUM_2515___yshE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04170___yshE-BPUM_2515___yshE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04170___yshE
# 2: BPUM_2515___yshE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 407
# Identity: 314/407 (77.1%)
# Similarity: 314/407 (77.1%)
# Gaps: 4/407 ( 1.0%)
# Score: 1174.0
#
#
#=======================================
BSNT_04170___ 1 ATGAGTGATTTTTGGGAAAACGAGCTTGTGGAAATCGCGGCATATTACAG 50
||||..|..|||||||||||.||.|||||||||||.||.||.|||||.||
BPUM_2515___y 1 ATGAAAGCCTTTTGGGAAAATGAACTTGTGGAAATTGCCGCCTATTATAG 50
BSNT_04170___ 51 TGTCGCGGTTCTCTGCCTCGTCCTCTTTTTGACTGTGTTTGAGCTGGTGA 100
.||.||.||.|||||.||||||.|.|||.|.||..|.|||||.||.||.|
BPUM_2515___y 51 CGTGGCCGTCCTCTGTCTCGTCTTATTTCTAACCATTTTTGAACTCGTCA 100
BSNT_04170___ 101 CGGCTTATAAAAACTGGGAAGAGATTCAAAAAGGAAATCTT-GCGGTGGC 149
|..||||||||||||||||||||||.||....||.|| ||| ||.||.||
BPUM_2515___y 101 CCTCTTATAAAAACTGGGAAGAGATCCAGCGTGGCAA-CTTAGCTGTTGC 149
BSNT_04170___ 150 AATGGCGACCGGCGGAAAAAT-TTTGGGAATCGCAAACGTATTTCAGCAT 198
.|||||.||.|||||.||.|| |||||| ||.||.||.||.|||||||||
BPUM_2515___y 150 CATGGCAACAGGCGGGAAGATCTTTGGG-ATTGCGAATGTGTTTCAGCAT 198
BSNT_04170___ 199 TCCATCTCCCAGCATAATTCGCTGCTGCAAATGATCGGCTGGGGCGTTTA 248
||.|||.|.|||||.|||||.||.||.||||||.|.||.||||||||.||
BPUM_2515___y 199 TCAATCGCACAGCACAATTCCCTTCTTCAAATGGTTGGATGGGGCGTATA 248
BSNT_04170___ 249 CGGGTTTGTTATGCTTCTGATCAGCTACTTTATTTTTGAGTTTTTGACTC 298
|||.|||||.|||||.||..|||||||.||.||||||||.|||||.||.|
BPUM_2515___y 249 CGGCTTTGTGATGCTGCTCGTCAGCTATTTCATTTTTGAATTTTTAACAC 298
BSNT_04170___ 299 CGCGGTTTAAAATTGATCAGGAAATCGAAAATGATAACCGGGCTGTCGGC 348
||||.||||||.|.||..|.||.||.|||||||||||..|.||.|||||.
BPUM_2515___y 299 CGCGTTTTAAAGTAGACAAAGAGATTGAAAATGATAATAGAGCGGTCGGG 348
BSNT_04170___ 349 TTTATTTCATTTGTCATTTCTGTCGGGCTTTCATTTGTGGTGGCAGCCGG 398
|||||||||.||.|||||||.||.|||||.||.|.|||.||.||||||||
BPUM_2515___y 349 TTTATTTCACTTATCATTTCAGTTGGGCTGTCTTATGTAGTAGCAGCCGG 398
BSNT_04170___ 399 AATATAA 405
.||.|||
BPUM_2515___y 399 CATTTAA 405
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