Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04164 and BPUM_2510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_04164___etfB.1.24716.seq
# -bsequence dna-align/BPUM_2510___etfB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04164___etfB-BPUM_2510___etfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04164___etfB-BPUM_2510___etfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04164___etfB
# 2: BPUM_2510___etfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 814
# Identity: 547/814 (67.2%)
# Similarity: 547/814 (67.2%)
# Gaps: 80/814 ( 9.8%)
# Score: 1690.5
#
#
#=======================================
BSNT_04164___ 1 ATGAATCTATTTGTACTGATGAAACGGACGTTTGACACAGAAGAAAAAA- 49
||||||.|||||||..|||||||.||.|||||||||||.|||||.||.|
BPUM_2510___e 1 ATGAATATATTTGTTTTGATGAAGCGTACGTTTGACACGGAAGAGAAGAT 50
BSNT_04164___ 50 -TCGTCATTGAAACAGGAAAGATTCAGGATGACGGAGCGGAATGGATCAT 98
||| |||.|..|.||....|||||.||.||.|||||.||.|..||.||
BPUM_2510___e 51 TTCG--ATTCAGTCTGGTGCAATTCAAGAAGATGGAGCAGAGTTCATTAT 98
BSNT_04164___ 99 TAATCCATATGATGAGTACGCGATAGAAGAAGCCATCCAGCT----GAAG 144
||||||.|||||.||||||||.|||||||||||.|||||||| ||.|
BPUM_2510___e 99 TAATCCTTATGACGAGTACGCCATAGAAGAAGCGATCCAGCTTCGCGACG 148
BSNT_04164___ 145 GAAAAGCATGGCGGCACGA--TCACCGCCGTCACGGTCGGCGGTGAAGAA 192
||||.||.|| .|| |.||||..||.||.||.|||.||||.||.
BPUM_2510___e 149 ----AGCACGGGGG--AGAAGTGACCGTTGTGACAGTTGGCAGTGAGGAT 192
BSNT_04164___ 193 GCGGAGAAAG-AATTGCGTACGGCGCTTGCCATGGGTTGTGACCAAGCTG 241
||||| |||| |..||.|.||.||||||||.|||||.||.||.|||||.|
BPUM_2510___e 193 GCGGA-AAAGCAGCTGAGAACAGCGCTTGCTATGGGCTGCGATCAAGCCG 241
BSNT_04164___ 242 TTTTAATCAACATAGAAGATGATCTT-GAAGAACCCGACCAATATTCCAT 290
|||||.|.||..|.|||||.|| ||| |||||....||.||||||||...
BPUM_2510___e 242 TTTTATTAAATGTGGAAGACGA-CTTAGAAGAGTGGGATCAATATTCAGC 290
BSNT_04164___ 291 TTCTCAAG-TTTTATACCACTATATGAAGGATCAGGAGTTTGATTTGATT 339
|||| |.| ||.|.|||||.|||.|.||.||..|.|||..|...|||| |
BPUM_2510___e 291 TTCT-ACGATTCTTTACCATTATTTAAAAGACAAAGAGGCTTCCTTGA-T 338
BSNT_04164___ 340 CTCGGC-GGAAATGTTGCCATTGACGGAGGATCAGGACAAGTGGCGCCTC 388
||..|| ||.|||||.||.||||||||.||.||.|||||.||.||.||.|
BPUM_2510___e 339 CTTAGCAGGGAATGTGGCAATTGACGGTGGCTCTGGACAGGTTGCCCCGC 388
BSNT_04164___ 389 GGCTTGCCGAGCTACTGGACATTCCGTGTATCACTACGATCACCAAACTC 438
|.|||||.||..||||.|...||.|.|.|.||||.|||||.||.|
BPUM_2510___e 389 GTCTTGCTGAATTACTTGGGTTTTCATATGTCACAACGATTACAA----- 433
BSNT_04164___ 439 GAAATCAA--------CGGCACTGATGC---------AGAAGCAGAAAGG 471
|.|.|||| ||||.|||.|.| |||.||||||.|.
BPUM_2510___e 434 GTATTCAAATTGATGGCGGCTCTGCTTCGATTGAACGAGATGCAGAAGGT 483
BSNT_04164___ 472 GACGTCGAAGGGGATGTTGAAAAAATCAAAAC----GACGCTCCC-ATTG 516
||.||.|||| |||...| || |||||| .|||
BPUM_2510___e 484 GATGTGGAAG---------------TCATTTCTGCTGA-GCTCCCGCTTG 517
BSNT_04164___ 517 CTTGTCACAGCTCAGCAGGGCTTAAACGAGCCGCGCTATCCATCGCTTCC 566
|||||||.||.|||||.||..|.||.|||||.|||||||||||..|.||
BPUM_2510___e 518 -TTGTCACTGCGCAGCAAGGTCTCAATGAGCCACGCTATCCATCATTACC 566
BSNT_04164___ 567 GGGAATTATGAAGGCTAAGAAAAAGCCGCTTGAAGAGCTTGAACTTGATG 616
.||.|||||||||||.|||||||||||..|.|||||..|.||||||||||
BPUM_2510___e 567 TGGCATTATGAAGGCAAAGAAAAAGCCTTTAGAAGAATTGGAACTTGATG 616
BSNT_04164___ 617 ATCTTGACCTGGACGAAGAGGATGCTGAACCA---AAGCTGAAAACCATT 663
||.|.||.||.||.|||||.|||| || ||| ||..|.|||||.|||
BPUM_2510___e 617 ATTTAGATCTCGATGAAGATGATG-TG--CCATATAAAATCAAAACAATT 663
BSNT_04164___ 664 GAACGTTTTCTGCCGCCGAAAAAAGAAGCCGGGAAGCTTCTCCAAGGTGA 713
||||||||..|.|||..|||||||||.|..||.|||.|.||....||.||
BPUM_2510___e 664 GAACGTTTCTTACCGGAGAAAAAAGAGGGTGGCAAGGTGCTGAGCGGAGA 713
BSNT_04164___ 714 GCCTGCTGAACAGGCAAAAGAGCTTGTTTCA---TTGCTCCGCAGCGAAG 760
||.|...||.||.|..|||||.| |..|| ||.||..|.|..||||
BPUM_2510___e 714 GCTTCAGGATCAAGTCAAAGAAC---TGACAGATTTACTTAGAAATGAAG 760
BSNT_04164___ 761 CTAAAGTCATTTAA 774
|.||.|||||.|||
BPUM_2510___e 761 CGAAGGTCATCTAA 774
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