Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04158 and BPUM_2507
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence dna-align/BSNT_04158___trxA.1.24716.seq
# -bsequence dna-align/BPUM_2507___trxA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04158___trxA-BPUM_2507___trxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04158___trxA-BPUM_2507___trxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04158___trxA
# 2: BPUM_2507___trxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity: 266/317 (83.9%)
# Similarity: 266/317 (83.9%)
# Gaps: 4/317 ( 1.3%)
# Score: 1102.0
#
#
#=======================================
BSNT_04158___ 1 ATGGCTATCGTAAAAGCAACTGA-TCAATCTTTCTCAGCTGAAACAAGC- 48
|||||.|||||||||||.||||| .||| |.||.|||...||||| .||
BPUM_2507___t 1 ATGGCAATCGTAAAAGCTACTGACGCAA-CATTTTCACAAGAAAC-TGCA 48
BSNT_04158___ 49 GAAGGCGTCGTACTGGCAGACTTCTGGGCTCCTTGGTGCGGACCTTGTAA 98
|||||.||.||..|.||.|||||.|||||.||.|||||||||||||||||
BPUM_2507___t 49 GAAGGTGTTGTTATTGCGGACTTTTGGGCACCATGGTGCGGACCTTGTAA 98
BSNT_04158___ 99 AATGATTGCACCTGTTCTTGAAGAATTGGATCAAGAAATGGGAGACAAAC 148
|||||||||.||.||||||||||||.|.||||||||||||||.||.|||.
BPUM_2507___t 99 AATGATTGCTCCAGTTCTTGAAGAACTTGATCAAGAAATGGGCGATAAAA 148
BSNT_04158___ 149 TGAAAATCGTAAAAATCGATGTAGACGAAAACCAAGAAACTGCCGGAAAA 198
|||||||.||||||||.||||||||.||.||||||||||||||.||.|||
BPUM_2507___t 149 TGAAAATTGTAAAAATTGATGTAGATGATAACCAAGAAACTGCTGGTAAA 198
BSNT_04158___ 199 TACGGCGTTATGAGCATCCCGACTCTTCTTGTGTTAAAAGACGGCGAAGT 248
||||||||.|||||.|||||.||.||||||||.|||||||||||||||||
BPUM_2507___t 199 TACGGCGTAATGAGTATCCCAACACTTCTTGTTTTAAAAGACGGCGAAGT 248
BSNT_04158___ 249 AGTTGAAACTTCAGTCGGCTTCAAACCAAAAGAAGCGCTTCAAGAGCTTG 298
.||.||||||||.||.||.|||||||||||||||||.|||...|||||||
BPUM_2507___t 249 GGTAGAAACTTCTGTTGGTTTCAAACCAAAAGAAGCACTTGCTGAGCTTG 298
BSNT_04158___ 299 TAAACAAACATCTTTAA 315
|.|||||||||||.|||
BPUM_2507___t 299 TTAACAAACATCTATAA 315
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