Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04151 and BPUM_2504

See Amino acid alignment / Visit BSNT_04151 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence dna-align/BSNT_04151___yslB.1.24716.seq
#    -bsequence dna-align/BPUM_2504___yslB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04151___yslB-BPUM_2504___yslB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04151___yslB-BPUM_2504___yslB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04151___yslB
# 2: BPUM_2504___yslB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity:     326/453 (72.0%)
# Similarity:   326/453 (72.0%)
# Gaps:          15/453 ( 3.3%)
# Score: 1089.0
# 
#
#=======================================

BSNT_04151___      1 ATGAAGTCTAAATTTGAAGCATCTA--TTGACAAC--CTAAAAGAAATTG     46
                     |||||   ||||||.||   |||||  || |.|||  |||||||||||||
BPUM_2504___y      1 ATGAA---TAAATTCGA---ATCTAACTT-AGAACAGCTAAAAGAAATTG     43

BSNT_04151___     47 AAATGAACGCCTATGCCTATGAACTAATACGAG-AGATCGTTCTCCCAGA     95
                     ||.|.||.|..|.||||||.||.||.|||||.| ||.|| |.||.||.||
BPUM_2504___y     44 AAGTCAATGGATTTGCCTACGAGCTGATACGCGAAGTTC-TGCTGCCTGA     92

BSNT_04151___     96 TATGCTTGGCCAAGATTACTCTTCCATGATGTATTGGGCAGGAAAACATC    145
                     |||.|||||.||.|||.|.||.||.||||||||||..||.||.||.|..|
BPUM_2504___y     93 TATTCTTGGTCAGGATCATTCATCTATGATGTATTTTGCGGGTAAGCTAC    142

BSNT_04151___    146 TCGCCCGTAAGTTTCCTCTTGAATCATGGGAGGAATTTCCGGCCTTCTTT    195
                     |.||.|||||.|||||||..||.|||||||||.|..|.||.|..||.||.
BPUM_2504___y    143 TTGCTCGTAAATTTCCTCAAGAGTCATGGGAGAAGATCCCCGAATTTTTC    192

BSNT_04151___    196 GAAGAAGCGGGCTGGGGAACCCTCACCAACGTAAGCGCTAAAAAACAGGA    245
                     .|.||.||.||.||||||||.|||||.|..||.....|.|||||||||||
BPUM_2504___y    193 CATGATGCCGGTTGGGGAACTCTCACGATGGTCCATTCAAAAAAACAGGA    242

BSNT_04151___    246 GCTTGAATTTGAACTTGAAGGGCCGATCATTTCCAACCGGCTTAAACATC    295
                     ..||||.|||||.||.|||||.||..|..|.||.||.||.||.|...|||
BPUM_2504___y    243 AATTGAGTTTGAGCTCGAAGGTCCACTTGTATCAAATCGACTCACCTATC    292

BSNT_04151___    296 AGAAAGAACCTTGCTTTCAGCTGGAGGCTGGTTTTATCGCTGAACAAATT    345
                     |.||.||.||.|||||||||.||||.||.||||||||.|||||||||||.
BPUM_2504___y    293 AAAAGGAGCCATGCTTTCAGATGGAAGCAGGTTTTATTGCTGAACAAATC    342

BSNT_04151___    346 CAATTAATGAATGATCAGATTGCCGAATCATATGAACAAGTAAAAAAGAG    395
                     ||..|..|.||.||.||..|.||.|||||.|||||||||||.||||||.|
BPUM_2504___y    343 CAGCTTCTTAACGAGCACGTGGCTGAATCTTATGAACAAGTGAAAAAGCG    392

BSNT_04151___    396 AGCCGATAAAGTGGTTCTAACTGTGAAATGGGATATGAAAGACCC-AGTG    444
                     .||.||||||||..||.||||.||.|||||||||.|.|.|||||| || .
BPUM_2504___y    393 TGCTGATAAAGTCATTTTAACCGTTAAATGGGATTTAAGAGACCCTAG-C    441

BSNT_04151___    445 TAA    447
                     |||
BPUM_2504___y    442 TAA    444


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