Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06028 and BPUM_2485

See Amino acid alignment / Visit BSNT_06028 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence dna-align/BSNT_06028.1.24716.seq
#    -bsequence dna-align/BPUM_2485.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06028-BPUM_2485.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06028-BPUM_2485.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06028
# 2: BPUM_2485
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     241/345 (69.9%)
# Similarity:   241/345 (69.9%)
# Gaps:          15/345 ( 4.3%)
# Score: 803.5
# 
#
#=======================================

BSNT_06028         1 ATGGAATATGATCCTTTAATAAAATCGTTAAAAGAGTATAAAGATAGTGA     50
                     ||||..||.|||.|.|||||.|.|.|.||||.|||.|.|.||.|.|||||
BPUM_2485          1 ATGGGTTACGATTCATTAATTAGAACATTAATAGATTTTGAAAAAAGTGA     50

BSNT_06028        51 CTTGATAATAGAGTGGGATAGTGGATTAAAGATTATTGGTGAACCAGACA    100
                     ..|||||.||||.|||.|.|||||.||.|..|||||.|||.|||.|||.|
BPUM_2485         51 TATGATACTAGAATGGAAAAGTGGTTTTAGAATTATCGGTCAACTAGATA    100

BSNT_06028       101 CACTCTTTGAAACAGACAATGGGTTGGATGACGATGATGTGAATTTTATC    150
                     |..|.|.|||||||||||||||.||.||.||.||.|||||.||||..|..
BPUM_2485        101 CGGTTTATGAAACAGACAATGGATTAGAAGATGACGATGTAAATTACACG    150

BSNT_06028       151 GAATATTATGCAGTTACATTTCAAGTAAATGATATTTTAGCTCATCCTAC    200
                     |||||..||||||.|..||||.|||.||||.|.||.||||||.|||||||
BPUM_2485        151 GAATACCATGCAGCTGGATTTAAAGCAAATAAAATATTAGCTAATCCTAC    200

BSNT_06028       201 ------TAGTGAAGAAAGTAGTTTATATAATTGGTTAATACAAAAGAAAG    244
                           |||||      |||.|.|.|||.|.|||||.|.|.||...||.|
BPUM_2485        201 CAATAATAGTG------GTATTGTTTATGAATGGTTGAGAGAAGGTAATG    244

BSNT_06028       245 GTTCATTAGTTGAAATTTCACTTTATGATGATCCGCCAAGTGCAGTTTTT    294
                     .||  ||| .|||||||||.||||||.|||||||.||||..|||||.|.|
BPUM_2485        245 CTT--TTA-CTGAAATTTCCCTTTATAATGATCCACCAAAAGCAGTATAT    291

BSNT_06028       295 TTAACTGACGGAGAAAGTATATGGAAAAGGGATAGTCAAAAATAA    339
                     |||.|.|||||..|||..||||||.||..||..|||.|..|||||
BPUM_2485        292 TTACCGGACGGTCAAAAAATATGGGAATTGGCCAGTGATGAATAA    336


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