Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04112 and BPUM_2472
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence dna-align/BSNT_04112___ilvB.1.24716.seq
# -bsequence dna-align/BPUM_2472___ilvB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04112___ilvB-BPUM_2472___ilvB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04112___ilvB-BPUM_2472___ilvB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04112___ilvB
# 2: BPUM_2472___ilvB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1748
# Identity: 1330/1748 (76.1%)
# Similarity: 1330/1748 (76.1%)
# Gaps: 46/1748 ( 2.6%)
# Score: 4987.0
#
#
#=======================================
BSNT_04112___ 1 ATGAGGACTAATGTACAGGTGGATTC---AGCATCTGCCAAATGTA-CAC 46
|||.||||.||||||||.|||||..| |.||||| ||.|.| |||
BPUM_2472___i 1 ATGGGGACAAATGTACAAGTGGAGACGGAAACATCT----AAAGCACCAC 46
BSNT_04112___ 47 AGACGATGAGCGGAGCATTAATGCTGATTGAATCATTAAAAAAAGAGAAA 96
|.|||||||.|||.|||.|.|||.|.||||||.||.|.||||.|||.|||
BPUM_2472___i 47 AAACGATGAACGGTGCACTCATGTTAATTGAAGCACTTAAAAGAGAAAAA 96
BSNT_04112___ 97 GTAGAAATGATTTTCGGTTATCCGGGCGGGGCTGTGCTTCCGATTTACGA 146
||||||.|.||||||||.|||||.|||||.||.||..|.|||||.|||||
BPUM_2472___i 97 GTAGAAGTCATTTTCGGATATCCAGGCGGAGCGGTTTTACCGATCTACGA 146
BSNT_04112___ 147 TAAGCTATACAATTCAGGGTTGGTACATATCCTTCCCCGTCACGAACAAG 196
|||..|.||..||||.|||||..|.|||.||||.||..|.||.|||||||
BPUM_2472___i 147 TAAAATTTATGATTCTGGGTTATTCCATGTCCTGCCAAGACATGAACAAG 196
BSNT_04112___ 197 GAGCAATTCATGCAGCGGAGGGATACGCAAGGGTCTCCGGAAAACCGGGT 246
||||.||||||||.||.||.|||||||||||.||.||.||.|||||.|||
BPUM_2472___i 197 GAGCGATTCATGCGGCAGAAGGATACGCAAGAGTATCTGGCAAACCAGGT 246
BSNT_04112___ 247 GTCGTCATTGCCACGTCAGGGCCGGGAGCGACAAACCTTGTTACAGGCCT 296
||.||||||||.||.|||||.||.|||||.||||||||.||.|||||..|
BPUM_2472___i 247 GTTGTCATTGCAACATCAGGACCTGGAGCAACAAACCTAGTCACAGGAAT 296
BSNT_04112___ 297 TGCTGATGCCATGATTGATTCATTGCCGTTAGTTGTCTTTACAGGGCAGG 346
|||.|||||.||||||||||||.|.||..|.||||||||.|||||.||||
BPUM_2472___i 297 TGCAGATGCAATGATTGATTCACTTCCTCTTGTTGTCTTCACAGGACAGG 346
BSNT_04112___ 347 TAGCAACCTCTGTAATCGGGAGC-GATGCATTTCAGGAAGCAGACATTTT 395
|.||||||||.||.|| .|||.| ||.||.||.||||||||||||.|..|
BPUM_2472___i 347 TGGCAACCTCAGTCAT-TGGATCAGACGCTTTCCAGGAAGCAGACGTGCT 395
BSNT_04112___ 396 AGGGATTACGATGCCAGTAACAAAACACAGCTACCAGGTTCGCCAGCCGG 445
.||.||.||.|||||..|.||||||||||||||||||||..|..|.||.|
BPUM_2472___i 396 CGGCATCACAATGCCTATCACAAAACACAGCTACCAGGTGAGAAATCCAG 445
BSNT_04112___ 446 AAGATCTGCCGCGCATCATTAAAGAAGCGTTCCATATTGCAACAACTGGA 495
|.||..|.||..||.|||||||||||||||||||.||.|||||.||.|||
BPUM_2472___i 446 AGGAATTACCTGGCGTCATTAAAGAAGCGTTCCACATCGCAACGACAGGA 495
BSNT_04112___ 496 AGACCCGGACCTGTATTGATTGATATTCCGAAAGATGTAGCAACAATTGA 545
|||||.||.||.||.||||||||||||||.||||||||.|||...|||||
BPUM_2472___i 496 AGACCTGGGCCAGTCTTGATTGATATTCCAAAAGATGTGGCAGGCATTGA 545
BSNT_04112___ 546 AGGA------GAATTCAGCTACGATCATGAGATGAATCTCCCGGGATACC 589
|||| ||| ||||||||....||..||.|.||.||.||.|
BPUM_2472___i 546 AGGAACGTTTGAA------TACGATCAGCCAATTGATTTACCAGGTTATC 589
BSNT_04112___ 590 AGCCGACAACAGAGCCGAATTATTTGCAGATCCGCAAGCTTGTGGAAGCC 639
||||.|.|..|||||||||.||||||||.||.||.||..|.||.|||||.
BPUM_2472___i 590 AGCCAAAAGTAGAGCCGAACTATTTGCAAATTCGTAAATTAGTAGAAGCT 639
BSNT_04112___ 640 GTGAGCAGTGCGAAAAAACCGGTGATCCTGGCGGGTGCGGGCGTATTGCA 689
||.|||||.|||||.|||||.||.||.||.||.||.||.|||||..|.||
BPUM_2472___i 640 GTCAGCAGAGCGAAGAAACCAGTCATTCTAGCAGGAGCTGGCGTTCTTCA 689
BSNT_04112___ 690 TGGAAAAGCGTCAGAAGAATTAAAAAATTATGCTGAACAGCAGCAAATCC 739
|||.|||||.||.||||||||||...|.||||..||.||.||||||||||
BPUM_2472___i 690 TGGCAAAGCATCTGAAGAATTAAGGCAGTATGTAGAGCAACAGCAAATCC 739
BSNT_04112___ 740 CTGTGGCACACACCCTTTTGGGGCTCGGAGGCTTCCCGGCTGACCATCCG 789
|.||.||.||.||.||..|.||.||.||.|||||||||||..|.||.||.
BPUM_2472___i 740 CAGTCGCTCATACACTGCTAGGACTTGGCGGCTTCCCGGCAAAGCACCCT 789
BSNT_04112___ 790 CTTTTCCTAGGGATGGCGGGAATGCACGGTACTTATACAGCCAATATGGC 839
|||||||||||||||||.||.|||||.||.||.||..|.||.||.|||||
BPUM_2472___i 790 CTTTTCCTAGGGATGGCTGGTATGCATGGCACATACGCGGCAAACATGGC 839
BSNT_04112___ 840 TCTTCATGAATGTGATCT----ATTAATCAGTATCGGCGCCCGTTTTGAT 885
.||||||.||||.||||| ||| ||| |||||.||..|.||.|||
BPUM_2472___i 840 ACTTCATCAATGCGATCTGCTCATT--TCA--ATCGGTGCGAGATTCGAT 885
BSNT_04112___ 886 GACCGTGTCACAGGAAACCTGAAACACTTTGCCAGAAAC--GCAAAGATA 933
||..|.||.||.||.||.||.||.|||||||| ||||| ||.|||.|.
BPUM_2472___i 886 GATAGGGTAACTGGCAATCTCAATCACTTTGC--GAAACATGCGAAGGTG 933
BSNT_04112___ 934 GCCCACATCGATATTGATCCAGCTGAAATCGGAAAAATCATGAAAACACA 983
||.|||||.|||||.||.|||||.|||||.||.||.|.|||..|.||.||
BPUM_2472___i 934 GCACACATTGATATCGACCCAGCAGAAATTGGCAAGAACATTCATACGCA 983
BSNT_04112___ 984 GATTCCTGTAGTCGGAGACAGCAAAATTGTCCTGCAGGAGCTGATCAAAC 1033
.||.||.||.||.||||||||.||..|.|||||.||.||||||||.||.|
BPUM_2472___i 984 TATCCCGGTTGTTGGAGACAGTAAGCTAGTCCTTCAAGAGCTGATTAAGC 1033
BSNT_04112___ 1034 AAGACGGCAAACAAAGCGATTCAAGCGAATGGAAAAAACAGCTCGCCGAA 1083
|||||||.||.|||.|.||.|||..||||||||||||.||.||.|...|.
BPUM_2472___i 1034 AAGACGGGAAGCAAGGAGAGTCAGACGAATGGAAAAACCAACTAGATCAG 1083
BSNT_04112___ 1084 TGGAAAGAAGAGTATCCGCTCTGGTATGTAGATAATGAAGAAGAAGGTTT 1133
|||||.|||||.|||||.|||||||||||.||.|||||||.|||.||.||
BPUM_2472___i 1084 TGGAAGGAAGAATATCCACTCTGGTATGTTGAAAATGAAGCAGAGGGCTT 1133
BSNT_04112___ 1134 TAAACCTCAGAAATTGATTGAATATATTCATCAATTTACAAAAGGAGAGG 1183
||||||.||.||..||||||||||.|||||||||||.||||||||.||.|
BPUM_2472___i 1134 TAAACCGCAAAAGCTGATTGAATACATTCATCAATTCACAAAAGGTGAAG 1183
BSNT_04112___ 1184 CCATTGTCGCAACAGATGTAGGCCAGCATCAAATGTGGTCAGCGCAATTT 1233
|||||||.|||||.|||||.||.|||||||||||||||.||||.|||||.
BPUM_2472___i 1184 CCATTGTGGCAACGGATGTTGGACAGCATCAAATGTGGGCAGCTCAATTC 1233
BSNT_04112___ 1234 TATCCGTTCCAAAAAGCAGATAAATGGGTCACGTCAGGCGGACTTGGAAC 1283
|||||.||..||||.|||||||||||||||||.||.|||||.|||||.||
BPUM_2472___i 1234 TATCCATTTGAAAATGCAGATAAATGGGTCACATCTGGCGGCCTTGGTAC 1283
BSNT_04112___ 1284 GATGGGATTCGGTCTTCCGGCGGCGATCGGCGCACAGCTGGCCGAAAAAG 1333
||||||.||||||.|.||.||.||.||.|||||.|||.|.||.||..|||
BPUM_2472___i 1284 GATGGGCTTCGGTTTACCAGCAGCCATTGGCGCTCAGTTAGCTGATCAAG 1333
BSNT_04112___ 1334 ATGCTACTGTTGTCGCGGTTGTCGGAGACGGCGGATTCCAAATGACGCTT 1383
|.||.||.|||||.|||.||.|.||||||||.||.|||||||||||.||.
BPUM_2472___i 1334 AGGCAACGGTTGTGGCGATTTTAGGAGACGGAGGTTTCCAAATGACCCTG 1383
BSNT_04112___ 1384 CAAGAACTCGATGTTATTCGCGAATTAAATCTTCCGGTCAAGGTAGTGA- 1432
||||||||.|..|||||.||.||..|.||.|||||.||.|| |||||
BPUM_2472___i 1384 CAAGAACTTGCCGTTATCCGTGAGCTGAACCTTCCAGTGAA---AGTGAT 1430
BSNT_04112___ 1433 --TTTTAAATAACGCTTGTCTCGGAATGGTCAGACAGTGGCAGGAAATTT 1480
||.|.|||||...|.|.||.||||||||.|||||.|||||.|||||||
BPUM_2472___i 1431 TGTTCTCAATAATCATAGCCTTGGAATGGTAAGACAATGGCAAGAAATTT 1480
BSNT_04112___ 1481 TCTATGAAGAACGTTATTCAGAATCTAAATTCGCTTC---TCAGCCTGAC 1527
||||.||||||||.||.|||.|.|||||||| ||| .|||||.|||
BPUM_2472___i 1481 TCTACGAAGAACGCTACTCATATTCTAAATT---TTCAGAGCAGCCGGAC 1527
BSNT_04112___ 1528 TTCGTCAAATTGTCCGAAGCATACGGCATTAAAGGCATCAGAATTTCATC 1577
|||||.|||||.||.|||||.||.|||||||||||.||||||||.|||||
BPUM_2472___i 1528 TTCGTTAAATTATCTGAAGCTTATGGCATTAAAGGAATCAGAATCTCATC 1577
BSNT_04112___ 1578 AGAAGCGGAAGCAAAGGTAAAGCTGGAAGAGGCATTAACATCAAGAGAAC 1627
|||.|..||.||.||.|.||||||.|||||.||..||||.||.|||||.|
BPUM_2472___i 1578 AGACGAAGAGGCGAAAGAAAAGCTTGAAGAAGCGCTAACCTCTAGAGAGC 1627
BSNT_04112___ 1628 CTGTTGTCATTGACGTGCGGGTTGCCAGCGAAGAAAAAGTATTCCCGATG 1677
|||||.||||.||.||....||.||.||.||.||||||||||||||||||
BPUM_2472___i 1628 CTGTTTTCATCGATGTCAATGTAGCGAGAGATGAAAAAGTATTCCCGATG 1677
BSNT_04112___ 1678 GTGGCTCCGGGGAAAGGGCTGCATGAAATGGTGGGGGTGAAACCTTGA 1725
||.||.|||||||||||.||.|||||.|||||||||||||||||||||
BPUM_2472___i 1678 GTAGCACCGGGGAAAGGACTTCATGAGATGGTGGGGGTGAAACCTTGA 1725
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