Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04102 and BPUM_2464
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:37
# Commandline: needle
# -asequence dna-align/BSNT_04102___tig.1.24716.seq
# -bsequence dna-align/BPUM_2464___tig.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04102___tig-BPUM_2464___tig.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04102___tig-BPUM_2464___tig.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04102___tig
# 2: BPUM_2464___tig
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1277
# Identity: 1102/1277 (86.3%)
# Similarity: 1102/1277 (86.3%)
# Gaps: 4/1277 ( 0.3%)
# Score: 4786.0
#
#
#=======================================
BSNT_04102___ 1 ATGTCTGTAAAATGGGAAAAACAAGAAGGCAACGAAGGCGTTTTAACGGT 50
|||||.|||||||||||||||||||||||.|||||||||||.|||||.||
BPUM_2464___t 1 ATGTCAGTAAAATGGGAAAAACAAGAAGGTAACGAAGGCGTCTTAACTGT 50
BSNT_04102___ 51 TGAAGTTGATGCTGAAACGTTTAAAACAGCACTTGATGATGCATTTAAAA 100
.|||||||||||||||||.|||||.|.|||||||||||||||.|||||.|
BPUM_2464___t 51 AGAAGTTGATGCTGAAACATTTAACAAAGCACTTGATGATGCGTTTAAGA 100
BSNT_04102___ 101 AAGTAGTAAAACAAGTTTCAATTCCTGGATTCCGTAAAGGTAAAATTCCT 150
||||.||.||.|||||.||.||.|||||||||||||||||.|||.|.||.
BPUM_2464___t 101 AAGTTGTCAAGCAAGTATCGATCCCTGGATTCCGTAAAGGGAAAGTACCA 150
BSNT_04102___ 151 CGCGGATTATTCGAACAGCGCTTTGGCGTAGAAGCTCTTTACCAAGATGC 200
||.||..|.|||||||||||.|||||.||||||.|||||||.||||||||
BPUM_2464___t 151 CGTGGTCTTTTCGAACAGCGTTTTGGTGTAGAATCTCTTTATCAAGATGC 200
BSNT_04102___ 201 TTTGGATATTCTTCTTCCTGTAGAATACCCTAAAGCGGTTGAAGAAGCTG 250
.||.||||||||||||||.||.||.||.||.|||||..|.||.|||||||
BPUM_2464___t 201 ATTAGATATTCTTCTTCCAGTTGAGTATCCAAAAGCAATCGACGAAGCTG 250
BSNT_04102___ 251 GAATCGAGCCTGTAGACCGTCCTGAAATCGATGTTGAAAAAATCGAAAAA 300
|.||.||.||.||.||.||.|||||||||||||||||.||||||||||||
BPUM_2464___t 251 GTATTGATCCAGTTGATCGCCCTGAAATCGATGTTGAGAAAATCGAAAAA 300
BSNT_04102___ 301 GGCGAAAGCTTAATCTTCACTGCGAAAGTAACAGTAAAACCTGAAGTGAA 350
|||||||||||||||||||||||.|||||||||||.||.|||||||||||
BPUM_2464___t 301 GGCGAAAGCTTAATCTTCACTGCAAAAGTAACAGTGAAGCCTGAAGTGAA 350
BSNT_04102___ 351 GCTTGGCGACTACAAAGG-CTTAGGCATTGAAAAAGACGACACAACTGTA 399
.|||||.||||||||||| |||| .|.|.||||||||||||.|.|||||.
BPUM_2464___t 351 ACTTGGTGACTACAAAGGTCTTA-ACGTAGAAAAAGACGACGCTACTGTT 399
BSNT_04102___ 400 ACTGACGAAGATGTTCAAAACGAACTAAAAGCGC-TTCAAGAGCGTCAAG 448
|||||.||||||||.|||.|.||..|||||| || |.|||.|.|||||||
BPUM_2464___t 400 ACTGATGAAGATGTACAAGAAGAGTTAAAAG-GCATGCAAAACCGTCAAG 448
BSNT_04102___ 449 CTGAGCTTGTTGTAAAAGAAGAAGGCGCCGTTGAAGAAGGAAACACAGTT 498
|||||||||||||.||||||||||||||..|.|||.|.||..|.||||||
BPUM_2464___t 449 CTGAGCTTGTTGTCAAAGAAGAAGGCGCAATCGAAAACGGCGATACAGTT 498
BSNT_04102___ 499 GTTCTTGATTTCGAAGGATTCGTTGACGGCGAAGCTTTCGAAGGCGGAAA 548
||||||||||||||||||||||||||.||.|||||.||||||||||||||
BPUM_2464___t 499 GTTCTTGATTTCGAAGGATTCGTTGATGGAGAAGCATTCGAAGGCGGAAA 548
BSNT_04102___ 549 AGCTGAAAACTACTCTCTAGAAGTAGGTTCTGGTTCATTCATCCCTGGCT 598
||||||||||||||||||.|||||||||||||||||||||||||||||.|
BPUM_2464___t 549 AGCTGAAAACTACTCTCTTGAAGTAGGTTCTGGTTCATTCATCCCTGGTT 598
BSNT_04102___ 599 TCGAAGATCAATTAGTTGGCCTTGAAGCAGGTGCTGAGAAGGATGTTGAA 648
|||||||.|||||||||||.|||||||||||.|||||.||.||.||.|||
BPUM_2464___t 599 TCGAAGAGCAATTAGTTGGTCTTGAAGCAGGCGCTGAAAAAGACGTAGAA 648
BSNT_04102___ 649 GTGACATTCCCTGAGGAGTACCACGCTGAAGATCTTGCAGGCAAACCAGC 698
||.||.|||||.||.||.||||||||||||||.||||||||.||||||||
BPUM_2464___t 649 GTCACTTTCCCAGAAGAATACCACGCTGAAGACCTTGCAGGTAAACCAGC 698
BSNT_04102___ 699 TGTGTTTAAAGTGAAAATTCACGAAATCAAAGCGAAAGAGCTTCCTGAGC 748
|||.||.||||||||||||||||||||||||||.|||||.|||||.|..|
BPUM_2464___t 699 TGTATTCAAAGTGAAAATTCACGAAATCAAAGCAAAAGAACTTCCAGCAC 748
BSNT_04102___ 749 TTGACGATGAATTCGCAAAAGATATCGATGAAGAAGTGGAAACACTTGCT 798
||||||||||.|||||.||||||.|.|||||||||||.|||||.||||||
BPUM_2464___t 749 TTGACGATGAGTTCGCGAAAGATGTTGATGAAGAAGTAGAAACGCTTGCT 798
BSNT_04102___ 799 GAATTAACTGAAAAAACAAAGAAACGTTTAGAAGAAGCAAAAGAAAACGA 848
|||.|||||||||||||||||||||||.|.||||||||.|||||||||||
BPUM_2464___t 799 GAACTAACTGAAAAAACAAAGAAACGTCTTGAAGAAGCGAAAGAAAACGA 848
BSNT_04102___ 849 AGCTGACGCTAAATTGCGTGAAGAGCTTGTTCTGAAAGCTTCTGAAAATG 898
|||.||.|.||||.|.|||||||||||.|||..|||||||||||||||||
BPUM_2464___t 849 AGCAGAAGGTAAACTTCGTGAAGAGCTAGTTGAGAAAGCTTCTGAAAATG 898
BSNT_04102___ 899 CTGAAATTGATGTGCCTCAAGCAATGGTCGACACTGAGCTTGACCGCATG 948
|.|||.||||..|.||.|||||.|||||.|||||.|||||.|||||||||
BPUM_2464___t 899 CGGAAGTTGACATCCCACAAGCGATGGTTGACACAGAGCTAGACCGCATG 948
BSNT_04102___ 949 CTGAAAGAATTCGAACAGCGTCTGCAAATGCAAGGCATGAACCTTGAGCT 998
.||||||||||||||||.||.||.|||||||||||.||||||||||||||
BPUM_2464___t 949 ATGAAAGAATTCGAACAACGCCTTCAAATGCAAGGAATGAACCTTGAGCT 998
BSNT_04102___ 999 TTACACTCAATTCTCAGGCCAAGATGAAGCTGCGCTTAAAGAGCAAATGA 1048
||||...|||||||||||.||||||||||.||||||||||||||||||||
BPUM_2464___t 999 TTACTTCCAATTCTCAGGACAAGATGAAGATGCGCTTAAAGAGCAAATGA 1048
BSNT_04102___ 1049 AAGAAGATGCTGAAAAACGCGTAAAATCTAACCTGACTCTTGAGGCGATT 1098
||||||||||||..||||||||||||||||||||.||.|||||.||.|||
BPUM_2464___t 1049 AAGAAGATGCTGCTAAACGCGTAAAATCTAACCTAACACTTGAAGCAATT 1098
BSNT_04102___ 1099 GCGAAAGCGGAAAACCTTGAAGTATCAGATGAGGAAGTTGATGCTGAGCT 1148
||....||.||||||.|..||||.||.|||||.|||||.||.|..|||||
BPUM_2464___t 1099 GCTGCTGCAGAAAACTTACAAGTGTCTGATGAAGAAGTAGAAGAAGAGCT 1148
BSNT_04102___ 1149 TACAAAAATGGCTGAAGCATACAACATGCCTGTTGAAAATATTAAACAAG 1198
|.||||||||||||||||||||||||||||..|||||||.||.|||||||
BPUM_2464___t 1149 TTCAAAAATGGCTGAAGCATACAACATGCCAATTGAAAACATCAAACAAG 1198
BSNT_04102___ 1199 CCATCGGTTCTACTGACGCGATGAAAGAAGATTTAAAAGTTCGCAAAGCA 1248
|.|||||.||||||||.||.||||||||||||.|||||||||||||||||
BPUM_2464___t 1199 CGATCGGATCTACTGAAGCAATGAAAGAAGATCTAAAAGTTCGCAAAGCA 1248
BSNT_04102___ 1249 ATTGATTTTCTTGTAGAAAACCGTTAA 1275
|||||||||||||||||||||||||||
BPUM_2464___t 1249 ATTGATTTTCTTGTAGAAAACCGTTAA 1275
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