Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04102 and BPUM_2464

See Amino acid alignment / Visit BSNT_04102 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence dna-align/BSNT_04102___tig.1.24716.seq
#    -bsequence dna-align/BPUM_2464___tig.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04102___tig-BPUM_2464___tig.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04102___tig-BPUM_2464___tig.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04102___tig
# 2: BPUM_2464___tig
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1277
# Identity:    1102/1277 (86.3%)
# Similarity:  1102/1277 (86.3%)
# Gaps:           4/1277 ( 0.3%)
# Score: 4786.0
# 
#
#=======================================

BSNT_04102___      1 ATGTCTGTAAAATGGGAAAAACAAGAAGGCAACGAAGGCGTTTTAACGGT     50
                     |||||.|||||||||||||||||||||||.|||||||||||.|||||.||
BPUM_2464___t      1 ATGTCAGTAAAATGGGAAAAACAAGAAGGTAACGAAGGCGTCTTAACTGT     50

BSNT_04102___     51 TGAAGTTGATGCTGAAACGTTTAAAACAGCACTTGATGATGCATTTAAAA    100
                     .|||||||||||||||||.|||||.|.|||||||||||||||.|||||.|
BPUM_2464___t     51 AGAAGTTGATGCTGAAACATTTAACAAAGCACTTGATGATGCGTTTAAGA    100

BSNT_04102___    101 AAGTAGTAAAACAAGTTTCAATTCCTGGATTCCGTAAAGGTAAAATTCCT    150
                     ||||.||.||.|||||.||.||.|||||||||||||||||.|||.|.||.
BPUM_2464___t    101 AAGTTGTCAAGCAAGTATCGATCCCTGGATTCCGTAAAGGGAAAGTACCA    150

BSNT_04102___    151 CGCGGATTATTCGAACAGCGCTTTGGCGTAGAAGCTCTTTACCAAGATGC    200
                     ||.||..|.|||||||||||.|||||.||||||.|||||||.||||||||
BPUM_2464___t    151 CGTGGTCTTTTCGAACAGCGTTTTGGTGTAGAATCTCTTTATCAAGATGC    200

BSNT_04102___    201 TTTGGATATTCTTCTTCCTGTAGAATACCCTAAAGCGGTTGAAGAAGCTG    250
                     .||.||||||||||||||.||.||.||.||.|||||..|.||.|||||||
BPUM_2464___t    201 ATTAGATATTCTTCTTCCAGTTGAGTATCCAAAAGCAATCGACGAAGCTG    250

BSNT_04102___    251 GAATCGAGCCTGTAGACCGTCCTGAAATCGATGTTGAAAAAATCGAAAAA    300
                     |.||.||.||.||.||.||.|||||||||||||||||.||||||||||||
BPUM_2464___t    251 GTATTGATCCAGTTGATCGCCCTGAAATCGATGTTGAGAAAATCGAAAAA    300

BSNT_04102___    301 GGCGAAAGCTTAATCTTCACTGCGAAAGTAACAGTAAAACCTGAAGTGAA    350
                     |||||||||||||||||||||||.|||||||||||.||.|||||||||||
BPUM_2464___t    301 GGCGAAAGCTTAATCTTCACTGCAAAAGTAACAGTGAAGCCTGAAGTGAA    350

BSNT_04102___    351 GCTTGGCGACTACAAAGG-CTTAGGCATTGAAAAAGACGACACAACTGTA    399
                     .|||||.||||||||||| |||| .|.|.||||||||||||.|.|||||.
BPUM_2464___t    351 ACTTGGTGACTACAAAGGTCTTA-ACGTAGAAAAAGACGACGCTACTGTT    399

BSNT_04102___    400 ACTGACGAAGATGTTCAAAACGAACTAAAAGCGC-TTCAAGAGCGTCAAG    448
                     |||||.||||||||.|||.|.||..|||||| || |.|||.|.|||||||
BPUM_2464___t    400 ACTGATGAAGATGTACAAGAAGAGTTAAAAG-GCATGCAAAACCGTCAAG    448

BSNT_04102___    449 CTGAGCTTGTTGTAAAAGAAGAAGGCGCCGTTGAAGAAGGAAACACAGTT    498
                     |||||||||||||.||||||||||||||..|.|||.|.||..|.||||||
BPUM_2464___t    449 CTGAGCTTGTTGTCAAAGAAGAAGGCGCAATCGAAAACGGCGATACAGTT    498

BSNT_04102___    499 GTTCTTGATTTCGAAGGATTCGTTGACGGCGAAGCTTTCGAAGGCGGAAA    548
                     ||||||||||||||||||||||||||.||.|||||.||||||||||||||
BPUM_2464___t    499 GTTCTTGATTTCGAAGGATTCGTTGATGGAGAAGCATTCGAAGGCGGAAA    548

BSNT_04102___    549 AGCTGAAAACTACTCTCTAGAAGTAGGTTCTGGTTCATTCATCCCTGGCT    598
                     ||||||||||||||||||.|||||||||||||||||||||||||||||.|
BPUM_2464___t    549 AGCTGAAAACTACTCTCTTGAAGTAGGTTCTGGTTCATTCATCCCTGGTT    598

BSNT_04102___    599 TCGAAGATCAATTAGTTGGCCTTGAAGCAGGTGCTGAGAAGGATGTTGAA    648
                     |||||||.|||||||||||.|||||||||||.|||||.||.||.||.|||
BPUM_2464___t    599 TCGAAGAGCAATTAGTTGGTCTTGAAGCAGGCGCTGAAAAAGACGTAGAA    648

BSNT_04102___    649 GTGACATTCCCTGAGGAGTACCACGCTGAAGATCTTGCAGGCAAACCAGC    698
                     ||.||.|||||.||.||.||||||||||||||.||||||||.||||||||
BPUM_2464___t    649 GTCACTTTCCCAGAAGAATACCACGCTGAAGACCTTGCAGGTAAACCAGC    698

BSNT_04102___    699 TGTGTTTAAAGTGAAAATTCACGAAATCAAAGCGAAAGAGCTTCCTGAGC    748
                     |||.||.||||||||||||||||||||||||||.|||||.|||||.|..|
BPUM_2464___t    699 TGTATTCAAAGTGAAAATTCACGAAATCAAAGCAAAAGAACTTCCAGCAC    748

BSNT_04102___    749 TTGACGATGAATTCGCAAAAGATATCGATGAAGAAGTGGAAACACTTGCT    798
                     ||||||||||.|||||.||||||.|.|||||||||||.|||||.||||||
BPUM_2464___t    749 TTGACGATGAGTTCGCGAAAGATGTTGATGAAGAAGTAGAAACGCTTGCT    798

BSNT_04102___    799 GAATTAACTGAAAAAACAAAGAAACGTTTAGAAGAAGCAAAAGAAAACGA    848
                     |||.|||||||||||||||||||||||.|.||||||||.|||||||||||
BPUM_2464___t    799 GAACTAACTGAAAAAACAAAGAAACGTCTTGAAGAAGCGAAAGAAAACGA    848

BSNT_04102___    849 AGCTGACGCTAAATTGCGTGAAGAGCTTGTTCTGAAAGCTTCTGAAAATG    898
                     |||.||.|.||||.|.|||||||||||.|||..|||||||||||||||||
BPUM_2464___t    849 AGCAGAAGGTAAACTTCGTGAAGAGCTAGTTGAGAAAGCTTCTGAAAATG    898

BSNT_04102___    899 CTGAAATTGATGTGCCTCAAGCAATGGTCGACACTGAGCTTGACCGCATG    948
                     |.|||.||||..|.||.|||||.|||||.|||||.|||||.|||||||||
BPUM_2464___t    899 CGGAAGTTGACATCCCACAAGCGATGGTTGACACAGAGCTAGACCGCATG    948

BSNT_04102___    949 CTGAAAGAATTCGAACAGCGTCTGCAAATGCAAGGCATGAACCTTGAGCT    998
                     .||||||||||||||||.||.||.|||||||||||.||||||||||||||
BPUM_2464___t    949 ATGAAAGAATTCGAACAACGCCTTCAAATGCAAGGAATGAACCTTGAGCT    998

BSNT_04102___    999 TTACACTCAATTCTCAGGCCAAGATGAAGCTGCGCTTAAAGAGCAAATGA   1048
                     ||||...|||||||||||.||||||||||.||||||||||||||||||||
BPUM_2464___t    999 TTACTTCCAATTCTCAGGACAAGATGAAGATGCGCTTAAAGAGCAAATGA   1048

BSNT_04102___   1049 AAGAAGATGCTGAAAAACGCGTAAAATCTAACCTGACTCTTGAGGCGATT   1098
                     ||||||||||||..||||||||||||||||||||.||.|||||.||.|||
BPUM_2464___t   1049 AAGAAGATGCTGCTAAACGCGTAAAATCTAACCTAACACTTGAAGCAATT   1098

BSNT_04102___   1099 GCGAAAGCGGAAAACCTTGAAGTATCAGATGAGGAAGTTGATGCTGAGCT   1148
                     ||....||.||||||.|..||||.||.|||||.|||||.||.|..|||||
BPUM_2464___t   1099 GCTGCTGCAGAAAACTTACAAGTGTCTGATGAAGAAGTAGAAGAAGAGCT   1148

BSNT_04102___   1149 TACAAAAATGGCTGAAGCATACAACATGCCTGTTGAAAATATTAAACAAG   1198
                     |.||||||||||||||||||||||||||||..|||||||.||.|||||||
BPUM_2464___t   1149 TTCAAAAATGGCTGAAGCATACAACATGCCAATTGAAAACATCAAACAAG   1198

BSNT_04102___   1199 CCATCGGTTCTACTGACGCGATGAAAGAAGATTTAAAAGTTCGCAAAGCA   1248
                     |.|||||.||||||||.||.||||||||||||.|||||||||||||||||
BPUM_2464___t   1199 CGATCGGATCTACTGAAGCAATGAAAGAAGATCTAAAAGTTCGCAAAGCA   1248

BSNT_04102___   1249 ATTGATTTTCTTGTAGAAAACCGTTAA   1275
                     |||||||||||||||||||||||||||
BPUM_2464___t   1249 ATTGATTTTCTTGTAGAAAACCGTTAA   1275


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